JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_6VX6dfa_proteocache.json2026-06-02 18:19 856K 
[ ]jp_6VX6dfa.msascores2026-06-02 18:19 179K 
[ ]jp_6VX6dfa.tar.gz2026-06-02 18:19 9.0MArchive containing complete results
[TXT]README2026-06-02 18:19 2.0KResults file descriptions
[TXT]jp_6VX6dfa.results_jalview_app.html2026-06-02 18:19 14KHTML prediction and alignment data
[TXT]jp_6VX6dfa.results_jalview.html2026-06-02 18:19 12KJalview results options
[TXT]LOG2026-06-02 18:19 4.8KJPred server log file
[TXT]jp_6VX6dfa.results.html2026-06-02 18:19 54KJPred results page
[TXT]jp_6VX6dfa.svg.html2026-06-02 18:19 48KJalview SVG summary of results
[ ]jp_6VX6dfa.concise.pdf2026-06-02 18:18 1.4MPDF prediction and alignment data
[TXT]jp_6VX6dfa.als2026-06-02 18:18 2.7KAlscript command file for PS/PDF output
[ ]jp_6VX6dfa.concise.blc2026-06-02 18:18 116KBLC format prediction and alignment data
[ ]jp_6VX6dfa.concise.fasta2026-06-02 18:18 117KPrediction: coiled-coil, solvent, alignment
[ ]jp_6VX6dfa.jalview2026-06-02 18:18 3.1KJalview annotation file for alignment
[TXT]jp_6VX6dfa.simple.html2026-06-02 18:18 1.0KBrief HTML: sequence and prediction only
[TXT]jp_6VX6dfa.html2026-06-02 18:18 291KHTML prediction and alignment data
[ ]jp_6VX6dfa.concise2026-06-02 18:18 225KPrediction: coiled-coil, solvent, alignment
[TXT]jp_6VX6dfa.coils.csv2026-06-02 18:18 726 COILS output in CSV format
[ ]jp_6VX6dfa.coilseq.lupas_282026-06-02 18:18 4.9KCOILS output, window length 28
[ ]jp_6VX6dfa.coilseq.lupas_142026-06-02 18:18 4.9KCOILS output, window length 14
[ ]jp_6VX6dfa.coilseq.lupas_212026-06-02 18:18 4.9KCOILS output, window length 21
[ ]jp_6VX6dfa.jnet2026-06-02 18:18 4.3KJnet secondary structure output
[ ]jp_6VX6dfa.hmm2026-06-02 18:18 22KHHMer2 profile of the alignment
[ ]jp_6VX6dfa.pssm2026-06-02 18:18 25KPSIBLAST PSSM for Jnet
[ ]jp_6VX6dfa.align2026-06-02 18:18 116KPSIBLAST alignment in FASTA format
[ ]jp_6VX6dfa.full_MSA.fasta2026-06-02 18:18 13MFull MSA before JPred filters in FASTA
[ ]jp_6VX6dfa.blast.gz2026-06-02 18:18 7.2MCompressed PSIBLAST output file
[TXT]jp_6VX6dfa.profile2026-06-02 18:17 19KPSIBLAST profile from alignment
[ ]jp_6VX6dfa.fasta2026-06-02 18:15 130 Input query sequence in FASTA format
[ ]CACHE_STATUS2026-06-02 18:15 15  
[ ]jp_6VX6dfa.seq2026-06-02 18:15 130 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.