3 Dee - Database of Protein Domain Definitions


[Search] [HELP]

The current cluster is formed at a score of 0.302

Ascend tree (bring in more domains)

Classes% of representative set
undefined 41.67
Alpha and beta (a/b) 8.33
Alpha and beta (a+b) 50.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 41.67 0.79
Alpha and beta (a/b)
Glycinamide ribonucleotide transformylase Domain II from 3Dee 8.33 0.36
Alpha and beta (a+b)
FAD/NAD-linked reductases, dimerisation (C-terminal) domain from 3Dee 16.67 1.04
N-terminal domain of enolase & muconate-lactonizing enzyme from 3Dee 25.00 1.55
Tetrahydrobiopterin biosynthesis enzymes from 3Dee 8.33 0.52

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

3grt-3 [seq. related domains] Alpha and beta (a+b) FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1joa-3 [seq. related domains] Alpha and beta (a+b) FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1garb-2 [seq. related domains] Alpha and beta (a/b) Glycinamide ribonucleotide transformylase Domain II
1mucb-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
2oneb-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
1dtn-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
5aop-4 [seq. related domains] undefined undefined
2prp-1 [seq. related domains] undefined undefined
5aop-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1gtqb-1 [seq. related domains] Alpha and beta (a+b) Tetrahydrobiopterin biosynthesis enzymes
1aiph-1 [seq. related domains] undefined undefined
1efud-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


3dee@compbio.dundee.ac.uk