3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 0.661

Ascend tree (bring in more domains)

Classes% of representative set
undefined 50.00
Peptides 16.67
All beta 33.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 50.00 0.47
Peptides
Coagulation factor IX fragment (residues 1-47) from 3Dee 16.67 2.04
All beta
Viral coat and capsid proteins from SCOP 33.33 0.89

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1mgx-1 [seq. related domains] Peptides Coagulation factor IX fragment (residues 1-47)
1a1rd-1 [seq. related domains] undefined undefined
1avfq-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1tmf4-1 [seq. related domains] All beta Viral coat and capsid proteins
2bpa3-1 [seq. related domains] All beta Viral coat and capsid proteins
2ezea-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk