compbio.metadata

Class PresetManager<T>

java.lang.Object

compbio.metadata.PresetManager<T>

Type Parameters:

T - type of executable.

public class PresetManager<T>
extends java.lang.Object

Collection of presets and methods to manipulate them @see Preset

Version:

1.0 December 2009

Author:

pvtroshin

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	LOCAL_ENGINE_LIMIT_PRESET
(package private) java.util.List<Preset<T>>	preset
(package private) java.lang.String	runnerClassName

Constructor Summary

Constructors

Constructor and Description
PresetManager()

Method Summary

Modifier and Type	Method and Description
(package private) boolean	containsValue(java.util.List<java.lang.String> values, java.lang.String value)
(package private) Argument<T>	getArgument(RunnerConfig<T> options, java.lang.String optionName)
Preset<T>	getPresetByName(java.lang.String presetName)
java.util.List<Preset<T>>	getPresets()
java.lang.String	getRunnerClassName()
(package private) boolean	isComposite(java.lang.String value)
(package private) boolean	isNumeric(java.lang.String value)
void	setPresets(java.util.List<Preset<T>> presets)
void	setRunnerClassName(java.lang.String runnerClassName)
java.lang.String	toString()
void	validate(RunnerConfig<T> options) Checks whether preset option and parameter are defined in RunnerConfig object.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

runnerClassName

java.lang.String runnerClassName

preset

java.util.List<Preset<T>> preset

LOCAL_ENGINE_LIMIT_PRESET

public static final java.lang.String LOCAL_ENGINE_LIMIT_PRESET

See Also:

Constant Field Values

Constructor Detail

PresetManager

public PresetManager()

Method Detail

getPresets

public java.util.List<Preset<T>> getPresets()

setPresets

public void setPresets(java.util.List<Preset<T>> presets)

getRunnerClassName

public java.lang.String getRunnerClassName()

Returns:

fully qualified class name of type T

setRunnerClassName

public void setRunnerClassName(java.lang.String runnerClassName)

getPresetByName

public Preset<T> getPresetByName(java.lang.String presetName)

Parameters:

presetName -

Returns:

preset by its name, null if no preset found

isComposite

boolean isComposite(java.lang.String value)

containsValue

boolean containsValue(java.util.List<java.lang.String> values,
                      java.lang.String value)

isNumeric

boolean isNumeric(java.lang.String value)

validate

public void validate(RunnerConfig<T> options)
              throws javax.xml.bind.ValidationException

Checks whether preset option and parameter are defined in RunnerConfig object. TODO handle parameters with values properly!

Throws:

javax.xml.bind.ValidationException - if preset is found to be invalid.

getArgument

Argument<T> getArgument(RunnerConfig<T> options,
                        java.lang.String optionName)
                 throws javax.xml.bind.ValidationException

Throws:

javax.xml.bind.ValidationException

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object