Uses of Class
compbio.metadata.JobStatus

Packages that use JobStatus

Package	Description
compbio.data.msa	Web Service interfaces for JAva Bioinformatics Analysis Web Services.
compbio.data.msa.jaxws
compbio.engine
compbio.engine.client
compbio.engine.cluster.drmaa
compbio.engine.local
compbio.metadata	A meta-data model for multiple sequence alignment web services Classes in this package have no dependencies to other sources in the project.
compbio.stat.collector
compbio.ws.server

Uses of JobStatus in compbio.data.msa

Methods in compbio.data.msa that return JobStatus

Modifier and Type	Method and Description
JobStatus	JManagement.getJobStatus(java.lang.String jobId) Return the status of the job.

Uses of JobStatus in compbio.data.msa.jaxws

Fields in compbio.data.msa.jaxws declared as JobStatus

Modifier and Type	Field and Description
private JobStatus	GetJobStatusResponse._return

Methods in compbio.data.msa.jaxws that return JobStatus

Modifier and Type	Method and Description
JobStatus	GetJobStatusResponse.getReturn()

Methods in compbio.data.msa.jaxws with parameters of type JobStatus

Modifier and Type	Method and Description
void	GetJobStatusResponse.setReturn(JobStatus _return)

Uses of JobStatus in compbio.engine

Methods in compbio.engine that return JobStatus

Modifier and Type	Method and Description
JobStatus	SyncExecutor.getJobStatus() Query the status of the job by its id.
JobStatus	AsyncExecutor.getJobStatus(java.lang.String jobId) Query the status of the job

Uses of JobStatus in compbio.engine.client

Methods in compbio.engine.client with parameters of type JobStatus

Modifier and Type	Method and Description
static boolean	EngineUtil.isMarked(java.lang.String workDirectory, JobStatus marker)
static boolean	Util.isMarked(java.lang.String workDirectory, JobStatus marker)
static boolean	EngineUtil.writeMarker(java.lang.String workDirectory, JobStatus fileType)
static boolean	Util.writeMarker(java.lang.String workDirectory, JobStatus fileType)

Uses of JobStatus in compbio.engine.cluster.drmaa

Methods in compbio.engine.cluster.drmaa that return JobStatus

Modifier and Type	Method and Description
JobStatus	JobRunner.getJobStatus()
JobStatus	ClusterRunner.getJobStatus()
(package private) static JobStatus	JobRunner.getJobStatus(java.lang.String jobId) This will never return clust.engine.JobStatus.CANCELLED as for sun grid engine cancelled job is the same as failed.
(package private) static JobStatus	ClusterRunner.getJobStatus(java.lang.String jobId) This will never return clust.engine.JobStatus.CANCELLED as for sun grid engine cancelled job is the same as failed.
JobStatus	AsyncJobRunner.getJobStatus(java.lang.String jobId) This will never return clust.engine.JobStatus.CANCELLED as for sun grid engine cancelled job is the same as failed.
JobStatus	AsyncClusterRunner.getJobStatus(java.lang.String jobId)
(package private) static JobStatus	JobRunner.getRecordedJobStatus(java.lang.String jobId)
(package private) static JobStatus	ClusterRunner.getRecordedJobStatus(java.lang.String jobId)

Uses of JobStatus in compbio.engine.local

Methods in compbio.engine.local that return JobStatus

Modifier and Type	Method and Description
JobStatus	LocalRunner.getJobStatus()
static JobStatus	LocalEngineUtil.getJobStatus(java.util.concurrent.Future<ConfiguredExecutable<?>> future)
JobStatus	AsyncLocalRunner.getJobStatus(java.lang.String jobId)
static JobStatus	LocalEngineUtil.getRecordedJobStatus(java.lang.String jobId)

Uses of JobStatus in compbio.metadata

Methods in compbio.metadata that return JobStatus

Modifier and Type	Method and Description
static JobStatus	JobStatus.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static JobStatus[]	JobStatus.values() Returns an array containing the constants of this enum type, in the order they are declared.

Uses of JobStatus in compbio.stat.collector

Methods in compbio.stat.collector with parameters of type JobStatus

Modifier and Type	Method and Description
(package private) boolean	JobDirectory.hasStatus(JobStatus status)

Uses of JobStatus in compbio.ws.server

Methods in compbio.ws.server that return JobStatus

Modifier and Type	Method and Description
JobStatus	GenericMetadataService.getJobStatus(java.lang.String jobId)
JobStatus	GLprobsWS.getJobStatus(java.lang.String jobId)
JobStatus	MafftWS.getJobStatus(java.lang.String jobId)
JobStatus	ClustalOWS.getJobStatus(java.lang.String jobId)
JobStatus	MSAprobsWS.getJobStatus(java.lang.String jobId)
JobStatus	MuscleWS.getJobStatus(java.lang.String jobId)
JobStatus	ClustalWS.getJobStatus(java.lang.String jobId)
JobStatus	TcoffeeWS.getJobStatus(java.lang.String jobId)
JobStatus	ProbconsWS.getJobStatus(java.lang.String jobId)
static JobStatus	WSUtil.getJobStatus(java.lang.String jobId)