Uses of Class
compbio.metadata.ResultNotAvailableException

Packages that use ResultNotAvailableException

Package	Description
compbio.data.msa	Web Service interfaces for JAva Bioinformatics Analysis Web Services.
compbio.engine
compbio.engine.client
compbio.engine.cluster.drmaa
compbio.engine.local
compbio.runner.conservation
compbio.runner.disorder
compbio.runner.msa	Wrappers for native executables for multiple sequence alignment (msa)
compbio.runner.structure
compbio.ws.server

Uses of ResultNotAvailableException in compbio.data.msa

Methods in compbio.data.msa that throw ResultNotAvailableException

Modifier and Type	Method and Description
ScoreManager	SequenceAnnotation.getAnnotation(java.lang.String jobId) Return the result of the job.
Alignment	MsaWS.getResult(java.lang.String jobId) Return the result of the job.

Uses of ResultNotAvailableException in compbio.engine

Methods in compbio.engine that throw ResultNotAvailableException

Modifier and Type	Method and Description
ConfiguredExecutable<?>	AsyncExecutor.getResults(java.lang.String jobId) Retrieve the results of the job.

Uses of ResultNotAvailableException in compbio.engine.client

Methods in compbio.engine.client that throw ResultNotAvailableException

Modifier and Type	Method and Description
<V> V	ConfExecutable.getResults()
<V> V	ConfiguredExecutable.getResults()
<V> V	ConfExecutable.getResults(java.lang.String directory)
<V> V	Executable.getResults(java.lang.String directory)
static ConfiguredExecutable<?>	EngineUtil.loadExecutable(java.lang.String taskId)
static ConfiguredExecutable<?>	Util.loadExecutable(java.lang.String taskId)

Uses of ResultNotAvailableException in compbio.engine.cluster.drmaa

Methods in compbio.engine.cluster.drmaa that throw ResultNotAvailableException

Modifier and Type	Method and Description
ConfiguredExecutable<?>	ClusterSession.getResults(java.lang.String taskId)
ConfiguredExecutable<?>	AsyncJobRunner.getResults(java.lang.String jobId)
ConfiguredExecutable<?>	AsyncClusterRunner.getResults(java.lang.String jobId)

Uses of ResultNotAvailableException in compbio.engine.local

Methods in compbio.engine.local that throw ResultNotAvailableException

Modifier and Type	Method and Description
static ConfiguredExecutable<?>	LocalEngineUtil.getResults(java.util.concurrent.Future<ConfiguredExecutable<?>> future, java.lang.String taskId)
ConfiguredExecutable<?>	AsyncLocalRunner.getResults(java.lang.String taskId)

Uses of ResultNotAvailableException in compbio.runner.conservation

Methods in compbio.runner.conservation that throw ResultNotAvailableException

Modifier and Type	Method and Description
ScoreManager	AACon.getResults(java.lang.String workDirectory)

Uses of ResultNotAvailableException in compbio.runner.disorder

Methods in compbio.runner.disorder that throw ResultNotAvailableException

Modifier and Type	Method and Description
ScoreManager	Jronn.getResults(java.lang.String workDirectory)
ScoreManager	IUPred.getResults(java.lang.String workDirectory)
ScoreManager	Disembl.getResults(java.lang.String workDirectory)
ScoreManager	GlobPlot.getResults(java.lang.String workDirectory)

Uses of ResultNotAvailableException in compbio.runner.msa

Methods in compbio.runner.msa that throw ResultNotAvailableException

Modifier and Type	Method and Description
Alignment	Probcons.getResults(java.lang.String workDirectory)
Alignment	Tcoffee.getResults(java.lang.String workDirectory)
Alignment	Mafft.getResults(java.lang.String workDirectory)
Alignment	Muscle.getResults(java.lang.String workDirectory)
Alignment	MSAprobs.getResults(java.lang.String workDirectory)
Alignment	ClustalO.getResults(java.lang.String workDirectory)
Alignment	ClustalW.getResults(java.lang.String workDirectory)
Alignment	GLprobs.getResults(java.lang.String workDirectory)

Uses of ResultNotAvailableException in compbio.runner.structure

Methods in compbio.runner.structure that throw ResultNotAvailableException

Modifier and Type	Method and Description
RNAStructScoreManager	RNAalifold.getResults(java.lang.String workDirectory)

Uses of ResultNotAvailableException in compbio.ws.server

Methods in compbio.ws.server that throw ResultNotAvailableException

Modifier and Type	Method and Description
ScoreManager	SequenceAnnotationService.getAnnotation(java.lang.String jobId)
static <T> ScoreManager	WSUtil.getAnnotation(java.lang.String jobId, org.apache.log4j.Logger log)
Alignment	GLprobsWS.getResult(java.lang.String jobId)
Alignment	MafftWS.getResult(java.lang.String jobId)
Alignment	ClustalOWS.getResult(java.lang.String jobId)
Alignment	MSAprobsWS.getResult(java.lang.String jobId)
Alignment	MuscleWS.getResult(java.lang.String jobId)
Alignment	ClustalWS.getResult(java.lang.String jobId)
Alignment	TcoffeeWS.getResult(java.lang.String jobId)
Alignment	ProbconsWS.getResult(java.lang.String jobId)