A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 15:23 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1ae9a_.name | 2015-04-17 14:53 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_9vrt7X0.align | 2015-04-17 15:22 | 174K | PSIBLAST alignment in FASTA format |
| jp_9vrt7X0.als | 2015-04-17 15:22 | 2.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_9vrt7X0.blast.gz | 2015-04-17 15:19 | 12M | Compressed PSIBLAST output file |
| jp_9vrt7X0.coils.csv | 2015-04-17 15:22 | 1.0K | COILS output in CSV format |
| jp_9vrt7X0.coilseq.lupas_14 | 2015-04-17 15:22 | 7.2K | COILS output, window length 14 |
| jp_9vrt7X0.coilseq.lupas_21 | 2015-04-17 15:22 | 7.2K | COILS output, window length 21 |
| jp_9vrt7X0.coilseq.lupas_28 | 2015-04-17 15:22 | 7.2K | COILS output, window length 28 |
| jp_9vrt7X0.concise | 2015-04-17 15:22 | 341K | Prediction: coiled-coil, solvent, alignment |
| jp_9vrt7X0.concise.blc | 2015-04-17 15:22 | 174K | BLC format prediction and alignment data |
| jp_9vrt7X0.concise.fasta | 2015-04-17 15:22 | 176K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_9vrt7X0.concise.pdf | 2015-04-17 15:22 | 1.3M | PDF prediction and alignment data |
| jp_9vrt7X0.concise.ps | 2015-04-17 15:22 | 21M | Prediction: coiled-coil, solvent, alignment |
| jp_9vrt7X0.fasta | 2015-04-17 14:53 | 186 | Input query sequence in FASTA format |
| jp_9vrt7X0.full_MSA.fasta | 2015-04-17 15:21 | 27M | Full MSA before JPred filters in FASTA |
| jp_9vrt7X0.full_MSA.fasta.noGaps.html | 2015-04-17 15:23 | 2.9M | Full MSA before JPred filters in FASTA |
| jp_9vrt7X0.full_MSA.fasta.withGaps.html | 2015-04-17 15:23 | 67M | Full MSA before JPred filters in FASTA |
| jp_9vrt7X0.hmm | 2015-04-17 15:22 | 32K | HHMer2 profile of the alignment |
| jp_9vrt7X0.html | 2015-04-17 15:22 | 368K | HTML prediction and alignment data |
| jp_9vrt7X0.input | 2015-04-17 14:53 | 178 | Raw input data for analysis |
| jp_9vrt7X0.jalview | 2015-04-17 15:22 | 4.3K | Jalview annotation file for alignment |
| jp_9vrt7X0.jnet | 2015-04-17 15:22 | 6.3K | Jnet secondary structure output |
| jp_9vrt7X0.profile | 2015-04-17 15:15 | 28K | PSIBLAST profile from alignment |
| jp_9vrt7X0.pssm | 2015-04-17 15:22 | 37K | PSIBLAST PSSM for Jnet |
| jp_9vrt7X0.results.html | 2016-02-15 12:16 | 78K | JPred results page |
| jp_9vrt7X0.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_9vrt7X0.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_9vrt7X0.seq | 2015-04-17 14:53 | 186 | Sequence data file |
| jp_9vrt7X0.simple.html | 2015-04-17 15:22 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_9vrt7X0.svg.html) | jp_9vrt7X0.svg.html | 2015-04-17 15:23 | 70K | Jalview SVG summary of results |
| jp_9vrt7X0.tar.gz | 2015-04-17 15:23 | 21M | Archive containing complete results |
