JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:25 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1byia_.name2015-04-17 17:45 0 Job name flag file
[ ]jp_4ke3GB7.align2015-04-17 19:23 220KPSIBLAST alignment in FASTA format
[TXT]jp_4ke3GB7.als2015-04-17 19:23 3.4KAlscript command file for PS/PDF output
[ ]jp_4ke3GB7.blast.gz2015-04-17 19:20 8.4MCompressed PSIBLAST output file
[TXT]jp_4ke3GB7.coils.csv2015-04-17 19:23 1.3KCOILS output in CSV format
[ ]jp_4ke3GB7.coilseq.lupas_142015-04-17 19:23 9.4KCOILS output, window length 14
[ ]jp_4ke3GB7.coilseq.lupas_212015-04-17 19:23 9.4KCOILS output, window length 21
[ ]jp_4ke3GB7.coilseq.lupas_282015-04-17 19:23 9.4KCOILS output, window length 28
[ ]jp_4ke3GB7.concise2015-04-17 19:23 434KPrediction: coiled-coil, solvent, alignment
[ ]jp_4ke3GB7.concise.blc2015-04-17 19:23 220KBLC format prediction and alignment data
[ ]jp_4ke3GB7.concise.fasta2015-04-17 19:23 222KPrediction: coiled-coil, solvent, alignment
[ ]jp_4ke3GB7.concise.pdf2015-04-17 19:24 1.6MPDF prediction and alignment data
[ ]jp_4ke3GB7.concise.ps2015-04-17 19:23 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_4ke3GB7.fasta2015-04-17 19:11 240 Input query sequence in FASTA format
[ ]jp_4ke3GB7.full_MSA.fasta2015-04-17 19:21 23MFull MSA before JPred filters in FASTA
[TXT]jp_4ke3GB7.full_MSA.fasta.noGaps.html2015-04-17 19:24 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_4ke3GB7.full_MSA.fasta.withGaps.html2015-04-17 19:24 60MFull MSA before JPred filters in FASTA
[ ]jp_4ke3GB7.hmm2015-04-17 19:23 42KHHMer2 profile of the alignment
[TXT]jp_4ke3GB7.html2015-04-17 19:23 417KHTML prediction and alignment data
[ ]jp_4ke3GB7.input2015-04-17 17:45 231 Raw input data for analysis
[ ]jp_4ke3GB7.jalview2015-04-17 19:23 5.3KJalview annotation file for alignment
[ ]jp_4ke3GB7.jnet2015-04-17 19:23 8.2KJnet secondary structure output
[TXT]jp_4ke3GB7.profile2015-04-17 19:18 36KPSIBLAST profile from alignment
[ ]jp_4ke3GB7.pssm2015-04-17 19:23 48KPSIBLAST PSSM for Jnet
[TXT]jp_4ke3GB7.results.html2016-02-15 12:16 99KJPred results page
[TXT]jp_4ke3GB7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_4ke3GB7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_4ke3GB7.seq2015-04-17 17:45 240 Sequence data file
[TXT]jp_4ke3GB7.simple.html2015-04-17 19:23 1.7KBrief HTML: sequence and prediction only
[TXT]jp_4ke3GB7.svg.html2015-04-17 19:25 91KJalview SVG summary of results
[ ]jp_4ke3GB7.tar.gz2015-04-17 19:25 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.