JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:17 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1dzfa1.name2015-04-17 17:46 0 Job name flag file
[ ]jp_xM3JKay.align2015-04-17 19:17 43KPSIBLAST alignment in FASTA format
[TXT]jp_xM3JKay.als2015-04-17 19:17 2.4KAlscript command file for PS/PDF output
[ ]jp_xM3JKay.blast.gz2015-04-17 19:17 210KCompressed PSIBLAST output file
[TXT]jp_xM3JKay.coils.csv2015-04-17 19:17 864 COILS output in CSV format
[ ]jp_xM3JKay.coilseq.lupas_142015-04-17 19:17 5.8KCOILS output, window length 14
[ ]jp_xM3JKay.coilseq.lupas_212015-04-17 19:17 5.8KCOILS output, window length 21
[ ]jp_xM3JKay.coilseq.lupas_282015-04-17 19:17 5.8KCOILS output, window length 28
[ ]jp_xM3JKay.concise2015-04-17 19:17 89KPrediction: coiled-coil, solvent, alignment
[ ]jp_xM3JKay.concise.blc2015-04-17 19:17 45KBLC format prediction and alignment data
[ ]jp_xM3JKay.concise.fasta2015-04-17 19:17 45KPrediction: coiled-coil, solvent, alignment
[ ]jp_xM3JKay.concise.pdf2015-04-17 19:17 295KPDF prediction and alignment data
[ ]jp_xM3JKay.concise.ps2015-04-17 19:17 5.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_xM3JKay.fasta2015-04-17 19:12 153 Input query sequence in FASTA format
[ ]jp_xM3JKay.full_MSA.fasta2015-04-17 19:17 283KFull MSA before JPred filters in FASTA
[TXT]jp_xM3JKay.full_MSA.fasta.noGaps.html2015-04-17 19:17 127KFull MSA before JPred filters in FASTA
[TXT]jp_xM3JKay.full_MSA.fasta.withGaps.html2015-04-17 19:17 1.1MFull MSA before JPred filters in FASTA
[ ]jp_xM3JKay.hmm2015-04-17 19:17 26KHHMer2 profile of the alignment
[TXT]jp_xM3JKay.html2015-04-17 19:17 111KHTML prediction and alignment data
[ ]jp_xM3JKay.input2015-04-17 17:46 146 Raw input data for analysis
[ ]jp_xM3JKay.jalview2015-04-17 19:17 3.6KJalview annotation file for alignment
[ ]jp_xM3JKay.jnet2015-04-17 19:17 5.1KJnet secondary structure output
[TXT]jp_xM3JKay.profile2015-04-17 19:14 23KPSIBLAST profile from alignment
[ ]jp_xM3JKay.pssm2015-04-17 19:17 30KPSIBLAST PSSM for Jnet
[TXT]jp_xM3JKay.results.html2016-02-15 12:16 64KJPred results page
[TXT]jp_xM3JKay.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_xM3JKay.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xM3JKay.seq2015-04-17 17:46 153 Sequence data file
[TXT]jp_xM3JKay.simple.html2015-04-17 19:17 1.3KBrief HTML: sequence and prediction only
[TXT]jp_xM3JKay.svg.html2015-04-17 19:17 56KJalview SVG summary of results
[ ]jp_xM3JKay.tar.gz2015-04-17 19:17 724KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.