JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:14 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1eexg_.name2015-04-17 19:00 0 Job name flag file
[ ]jp_HfAYxbp.align2015-04-17 21:14 13KPSIBLAST alignment in FASTA format
[TXT]jp_HfAYxbp.als2015-04-17 21:14 2.4KAlscript command file for PS/PDF output
[ ]jp_HfAYxbp.blast.gz2015-04-17 21:14 37KCompressed PSIBLAST output file
[TXT]jp_HfAYxbp.coils.csv2015-04-17 21:14 852 COILS output in CSV format
[ ]jp_HfAYxbp.coilseq.lupas_142015-04-17 21:14 5.8KCOILS output, window length 14
[ ]jp_HfAYxbp.coilseq.lupas_212015-04-17 21:14 5.8KCOILS output, window length 21
[ ]jp_HfAYxbp.coilseq.lupas_282015-04-17 21:14 5.8KCOILS output, window length 28
[ ]jp_HfAYxbp.concise2015-04-17 21:14 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_HfAYxbp.concise.blc2015-04-17 21:14 15KBLC format prediction and alignment data
[ ]jp_HfAYxbp.concise.fasta2015-04-17 21:14 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_HfAYxbp.concise.pdf2015-04-17 21:14 98KPDF prediction and alignment data
[ ]jp_HfAYxbp.concise.ps2015-04-17 21:14 1.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_HfAYxbp.fasta2015-04-17 21:11 151 Input query sequence in FASTA format
[ ]jp_HfAYxbp.full_MSA.fasta2015-04-17 21:14 23KFull MSA before JPred filters in FASTA
[TXT]jp_HfAYxbp.full_MSA.fasta.noGaps.html2015-04-17 21:14 38KFull MSA before JPred filters in FASTA
[TXT]jp_HfAYxbp.full_MSA.fasta.withGaps.html2015-04-17 21:14 49KFull MSA before JPred filters in FASTA
[ ]jp_HfAYxbp.hmm2015-04-17 21:14 26KHHMer2 profile of the alignment
[TXT]jp_HfAYxbp.html2015-04-17 21:14 44KHTML prediction and alignment data
[ ]jp_HfAYxbp.input2015-04-17 19:00 144 Raw input data for analysis
[ ]jp_HfAYxbp.jalview2015-04-17 21:14 3.6KJalview annotation file for alignment
[ ]jp_HfAYxbp.jnet2015-04-17 21:14 5.1KJnet secondary structure output
[TXT]jp_HfAYxbp.profile2015-04-17 21:13 22KPSIBLAST profile from alignment
[ ]jp_HfAYxbp.pssm2015-04-17 21:14 29KPSIBLAST PSSM for Jnet
[TXT]jp_HfAYxbp.results.html2016-02-15 12:16 64KJPred results page
[TXT]jp_HfAYxbp.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_HfAYxbp.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_HfAYxbp.seq2015-04-17 19:00 151 Sequence data file
[TXT]jp_HfAYxbp.simple.html2015-04-17 21:14 1.3KBrief HTML: sequence and prediction only
[TXT]jp_HfAYxbp.svg.html2015-04-17 21:14 56KJalview SVG summary of results
[ ]jp_HfAYxbp.tar.gz2015-04-17 21:14 199KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.