JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:16 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ex0a2.name2015-04-17 15:13 0 Job name flag file
[ ]jp_r7VTjTZ.align2015-04-17 15:16 53KPSIBLAST alignment in FASTA format
[TXT]jp_r7VTjTZ.als2015-04-17 15:16 2.2KAlscript command file for PS/PDF output
[ ]jp_r7VTjTZ.blast.gz2015-04-17 15:16 234KCompressed PSIBLAST output file
[TXT]jp_r7VTjTZ.coils.csv2015-04-17 15:16 702 COILS output in CSV format
[ ]jp_r7VTjTZ.coilseq.lupas_142015-04-17 15:16 4.7KCOILS output, window length 14
[ ]jp_r7VTjTZ.coilseq.lupas_212015-04-17 15:16 4.7KCOILS output, window length 21
[ ]jp_r7VTjTZ.coilseq.lupas_282015-04-17 15:16 4.7KCOILS output, window length 28
[ ]jp_r7VTjTZ.concise2015-04-17 15:16 105KPrediction: coiled-coil, solvent, alignment
[ ]jp_r7VTjTZ.concise.blc2015-04-17 15:16 54KBLC format prediction and alignment data
[ ]jp_r7VTjTZ.concise.fasta2015-04-17 15:16 54KPrediction: coiled-coil, solvent, alignment
[ ]jp_r7VTjTZ.concise.pdf2015-04-17 15:16 367KPDF prediction and alignment data
[ ]jp_r7VTjTZ.concise.ps2015-04-17 15:16 6.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_r7VTjTZ.fasta2015-04-17 15:14 126 Input query sequence in FASTA format
[ ]jp_r7VTjTZ.full_MSA.fasta2015-04-17 15:16 389KFull MSA before JPred filters in FASTA
[TXT]jp_r7VTjTZ.full_MSA.fasta.noGaps.html2015-04-17 15:16 206KFull MSA before JPred filters in FASTA
[TXT]jp_r7VTjTZ.full_MSA.fasta.withGaps.html2015-04-17 15:16 1.8MFull MSA before JPred filters in FASTA
[ ]jp_r7VTjTZ.hmm2015-04-17 15:16 21KHHMer2 profile of the alignment
[TXT]jp_r7VTjTZ.html2015-04-17 15:16 142KHTML prediction and alignment data
[ ]jp_r7VTjTZ.input2015-04-17 15:13 119 Raw input data for analysis
[ ]jp_r7VTjTZ.jalview2015-04-17 15:16 3.1KJalview annotation file for alignment
[ ]jp_r7VTjTZ.jnet2015-04-17 15:16 4.2KJnet secondary structure output
[TXT]jp_r7VTjTZ.profile2015-04-17 15:15 18KPSIBLAST profile from alignment
[ ]jp_r7VTjTZ.pssm2015-04-17 15:16 24KPSIBLAST PSSM for Jnet
[TXT]jp_r7VTjTZ.results.html2016-02-15 12:16 53KJPred results page
[TXT]jp_r7VTjTZ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_r7VTjTZ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_r7VTjTZ.seq2015-04-17 15:13 126 Sequence data file
[TXT]jp_r7VTjTZ.simple.html2015-04-17 15:16 1.2KBrief HTML: sequence and prediction only
[TXT]jp_r7VTjTZ.svg.html2015-04-17 15:16 45KJalview SVG summary of results
[ ]jp_r7VTjTZ.tar.gz2015-04-17 15:16 903KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.