JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:13 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fjra_.name2015-04-17 15:24 0 Job name flag file
[ ]jp_fLtLk18.align2015-04-17 16:12 31KPSIBLAST alignment in FASTA format
[TXT]jp_fLtLk18.als2015-04-17 16:12 3.5KAlscript command file for PS/PDF output
[ ]jp_fLtLk18.blast.gz2015-04-17 16:12 85KCompressed PSIBLAST output file
[TXT]jp_fLtLk18.coils.csv2015-04-17 16:12 1.1KCOILS output in CSV format
[ ]jp_fLtLk18.coilseq.lupas_142015-04-17 16:12 7.9KCOILS output, window length 14
[ ]jp_fLtLk18.coilseq.lupas_212015-04-17 16:12 7.9KCOILS output, window length 21
[ ]jp_fLtLk18.coilseq.lupas_282015-04-17 16:12 7.9KCOILS output, window length 28
[ ]jp_fLtLk18.concise2015-04-17 16:12 68KPrediction: coiled-coil, solvent, alignment
[ ]jp_fLtLk18.concise.blc2015-04-17 16:12 34KBLC format prediction and alignment data
[ ]jp_fLtLk18.concise.fasta2015-04-17 16:12 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_fLtLk18.concise.pdf2015-04-17 16:12 211KPDF prediction and alignment data
[ ]jp_fLtLk18.concise.ps2015-04-17 16:12 3.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_fLtLk18.fasta2015-04-17 15:24 203 Input query sequence in FASTA format
[ ]jp_fLtLk18.full_MSA.fasta2015-04-17 16:12 123KFull MSA before JPred filters in FASTA
[TXT]jp_fLtLk18.full_MSA.fasta.noGaps.html2015-04-17 16:12 72KFull MSA before JPred filters in FASTA
[TXT]jp_fLtLk18.full_MSA.fasta.withGaps.html2015-04-17 16:12 687KFull MSA before JPred filters in FASTA
[ ]jp_fLtLk18.hmm2015-04-17 16:12 35KHHMer2 profile of the alignment
[TXT]jp_fLtLk18.html2015-04-17 16:12 75KHTML prediction and alignment data
[ ]jp_fLtLk18.input2015-04-17 15:24 195 Raw input data for analysis
[ ]jp_fLtLk18.jalview2015-04-17 16:12 4.5KJalview annotation file for alignment
[ ]jp_fLtLk18.jnet2015-04-17 16:12 6.9KJnet secondary structure output
[TXT]jp_fLtLk18.profile2015-04-17 16:07 30KPSIBLAST profile from alignment
[ ]jp_fLtLk18.pssm2015-04-17 16:12 40KPSIBLAST PSSM for Jnet
[TXT]jp_fLtLk18.results.html2016-02-15 12:16 83KJPred results page
[TXT]jp_fLtLk18.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fLtLk18.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fLtLk18.seq2015-04-17 15:24 203 Sequence data file
[TXT]jp_fLtLk18.simple.html2015-04-17 16:12 1.6KBrief HTML: sequence and prediction only
[TXT]jp_fLtLk18.svg.html2015-04-17 16:13 75KJalview SVG summary of results
[ ]jp_fLtLk18.tar.gz2015-04-17 16:13 454KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.