JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:17 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g73a_.name2015-04-17 17:48 0 Job name flag file
[ ]jp_ztBHkF4.align2015-04-17 19:17 11KPSIBLAST alignment in FASTA format
[TXT]jp_ztBHkF4.als2015-04-17 19:17 1.5KAlscript command file for PS/PDF output
[ ]jp_ztBHkF4.blast.gz2015-04-17 19:17 34KCompressed PSIBLAST output file
[TXT]jp_ztBHkF4.coils.csv2015-04-17 19:17 972 COILS output in CSV format
[ ]jp_ztBHkF4.coilseq.lupas_142015-04-17 19:17 6.6KCOILS output, window length 14
[ ]jp_ztBHkF4.coilseq.lupas_212015-04-17 19:17 6.6KCOILS output, window length 21
[ ]jp_ztBHkF4.coilseq.lupas_282015-04-17 19:17 6.6KCOILS output, window length 28
[ ]jp_ztBHkF4.concise2015-04-17 19:17 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_ztBHkF4.concise.blc2015-04-17 19:17 14KBLC format prediction and alignment data
[ ]jp_ztBHkF4.concise.fasta2015-04-17 19:17 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_ztBHkF4.concise.pdf2015-04-17 19:17 85KPDF prediction and alignment data
[ ]jp_ztBHkF4.concise.ps2015-04-17 19:17 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_ztBHkF4.fasta2015-04-17 19:15 172 Input query sequence in FASTA format
[ ]jp_ztBHkF4.full_MSA.fasta2015-04-17 19:17 35KFull MSA before JPred filters in FASTA
[TXT]jp_ztBHkF4.full_MSA.fasta.noGaps.html2015-04-17 19:17 39KFull MSA before JPred filters in FASTA
[TXT]jp_ztBHkF4.full_MSA.fasta.withGaps.html2015-04-17 19:17 87KFull MSA before JPred filters in FASTA
[ ]jp_ztBHkF4.hmm2015-04-17 19:17 29KHHMer2 profile of the alignment
[TXT]jp_ztBHkF4.html2015-04-17 19:17 44KHTML prediction and alignment data
[ ]jp_ztBHkF4.input2015-04-17 17:48 164 Raw input data for analysis
[ ]jp_ztBHkF4.jalview2015-04-17 19:17 4.1KJalview annotation file for alignment
[ ]jp_ztBHkF4.jnet2015-04-17 19:17 5.8KJnet secondary structure output
[TXT]jp_ztBHkF4.profile2015-04-17 19:16 25KPSIBLAST profile from alignment
[ ]jp_ztBHkF4.pssm2015-04-17 19:17 34KPSIBLAST PSSM for Jnet
[TXT]jp_ztBHkF4.results.html2016-02-15 12:17 67KJPred results page
[TXT]jp_ztBHkF4.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_ztBHkF4.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_ztBHkF4.seq2015-04-17 17:48 172 Sequence data file
[TXT]jp_ztBHkF4.simple.html2015-04-17 19:17 1.2KBrief HTML: sequence and prediction only
[TXT]jp_ztBHkF4.svg.html2015-04-17 19:17 59KJalview SVG summary of results
[ ]jp_ztBHkF4.tar.gz2015-04-17 19:17 181KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.