JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:41 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gcia_.name2015-04-17 15:57 0 Job name flag file
[ ]jp_Sb2ycZb.align2015-04-17 16:38 263KPSIBLAST alignment in FASTA format
[TXT]jp_Sb2ycZb.als2015-04-17 16:38 3.6KAlscript command file for PS/PDF output
[ ]jp_Sb2ycZb.blast.gz2015-04-17 16:33 38MCompressed PSIBLAST output file
[TXT]jp_Sb2ycZb.coils.csv2015-04-17 16:38 1.6KCOILS output in CSV format
[ ]jp_Sb2ycZb.coilseq.lupas_142015-04-17 16:38 11KCOILS output, window length 14
[ ]jp_Sb2ycZb.coilseq.lupas_212015-04-17 16:38 11KCOILS output, window length 21
[ ]jp_Sb2ycZb.coilseq.lupas_282015-04-17 16:38 11KCOILS output, window length 28
[ ]jp_Sb2ycZb.concise2015-04-17 16:38 521KPrediction: coiled-coil, solvent, alignment
[ ]jp_Sb2ycZb.concise.blc2015-04-17 16:38 263KBLC format prediction and alignment data
[ ]jp_Sb2ycZb.concise.fasta2015-04-17 16:38 265KPrediction: coiled-coil, solvent, alignment
[ ]jp_Sb2ycZb.concise.pdf2015-04-17 16:39 1.8MPDF prediction and alignment data
[ ]jp_Sb2ycZb.concise.ps2015-04-17 16:38 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_Sb2ycZb.fasta2015-04-17 16:16 285 Input query sequence in FASTA format
[ ]jp_Sb2ycZb.full_MSA.fasta2015-04-17 16:36 74MFull MSA before JPred filters in FASTA
[TXT]jp_Sb2ycZb.full_MSA.fasta.noGaps.html2015-04-17 16:40 4.0MFull MSA before JPred filters in FASTA
[TXT]jp_Sb2ycZb.full_MSA.fasta.withGaps.html2015-04-17 16:40 140MFull MSA before JPred filters in FASTA
[ ]jp_Sb2ycZb.hmm2015-04-17 16:38 50KHHMer2 profile of the alignment
[TXT]jp_Sb2ycZb.html2015-04-17 16:38 463KHTML prediction and alignment data
[ ]jp_Sb2ycZb.input2015-04-17 15:57 276 Raw input data for analysis
[ ]jp_Sb2ycZb.jalview2015-04-17 16:38 6.1KJalview annotation file for alignment
[ ]jp_Sb2ycZb.jnet2015-04-17 16:38 9.8KJnet secondary structure output
[TXT]jp_Sb2ycZb.profile2015-04-17 16:31 43KPSIBLAST profile from alignment
[ ]jp_Sb2ycZb.pssm2015-04-17 16:38 58KPSIBLAST PSSM for Jnet
[TXT]jp_Sb2ycZb.results.html2016-02-15 12:17 115KJPred results page
[TXT]jp_Sb2ycZb.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Sb2ycZb.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Sb2ycZb.seq2015-04-17 15:57 285 Sequence data file
[TXT]jp_Sb2ycZb.simple.html2015-04-17 16:38 1.8KBrief HTML: sequence and prediction only
[TXT]jp_Sb2ycZb.svg.html2015-04-17 16:40 107KJalview SVG summary of results
[ ]jp_Sb2ycZb.tar.gz2015-04-17 16:41 54MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.