JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:21 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gmua1.name2015-04-17 15:57 0 Job name flag file
[ ]jp_GTIUeru.align2015-04-17 16:21 44KPSIBLAST alignment in FASTA format
[TXT]jp_GTIUeru.als2015-04-17 16:21 2.2KAlscript command file for PS/PDF output
[ ]jp_GTIUeru.blast.gz2015-04-17 16:21 119KCompressed PSIBLAST output file
[TXT]jp_GTIUeru.coils.csv2015-04-17 16:21 450 COILS output in CSV format
[ ]jp_GTIUeru.coilseq.lupas_142015-04-17 16:21 2.9KCOILS output, window length 14
[ ]jp_GTIUeru.coilseq.lupas_212015-04-17 16:21 2.9KCOILS output, window length 21
[ ]jp_GTIUeru.coilseq.lupas_282015-04-17 16:21 2.9KCOILS output, window length 28
[ ]jp_GTIUeru.concise2015-04-17 16:21 86KPrediction: coiled-coil, solvent, alignment
[ ]jp_GTIUeru.concise.blc2015-04-17 16:21 45KBLC format prediction and alignment data
[ ]jp_GTIUeru.concise.fasta2015-04-17 16:21 45KPrediction: coiled-coil, solvent, alignment
[ ]jp_GTIUeru.concise.pdf2015-04-17 16:21 275KPDF prediction and alignment data
[ ]jp_GTIUeru.concise.ps2015-04-17 16:21 4.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_GTIUeru.fasta2015-04-17 16:16 83 Input query sequence in FASTA format
[ ]jp_GTIUeru.full_MSA.fasta2015-04-17 16:21 229KFull MSA before JPred filters in FASTA
[TXT]jp_GTIUeru.full_MSA.fasta.noGaps.html2015-04-17 16:21 147KFull MSA before JPred filters in FASTA
[TXT]jp_GTIUeru.full_MSA.fasta.withGaps.html2015-04-17 16:21 1.0MFull MSA before JPred filters in FASTA
[ ]jp_GTIUeru.hmm2015-04-17 16:21 13KHHMer2 profile of the alignment
[TXT]jp_GTIUeru.html2015-04-17 16:21 149KHTML prediction and alignment data
[ ]jp_GTIUeru.input2015-04-17 15:57 77 Raw input data for analysis
[ ]jp_GTIUeru.jalview2015-04-17 16:21 2.2KJalview annotation file for alignment
[ ]jp_GTIUeru.jnet2015-04-17 16:21 2.6KJnet secondary structure output
[TXT]jp_GTIUeru.profile2015-04-17 16:19 12KPSIBLAST profile from alignment
[ ]jp_GTIUeru.pssm2015-04-17 16:21 15KPSIBLAST PSSM for Jnet
[TXT]jp_GTIUeru.results.html2016-02-15 12:17 39KJPred results page
[TXT]jp_GTIUeru.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GTIUeru.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GTIUeru.seq2015-04-17 15:57 83 Sequence data file
[TXT]jp_GTIUeru.simple.html2015-04-17 16:21 1.2KBrief HTML: sequence and prediction only
[TXT]jp_GTIUeru.svg.html2015-04-17 16:21 31KJalview SVG summary of results
[ ]jp_GTIUeru.tar.gz2015-04-17 16:21 590KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.