JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:23 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gtea1.name2015-04-17 17:13 0 Job name flag file
[ ]jp_fDmWRH8.align2015-04-17 18:23 141KPSIBLAST alignment in FASTA format
[TXT]jp_fDmWRH8.als2015-04-17 18:23 2.6KAlscript command file for PS/PDF output
[ ]jp_fDmWRH8.blast.gz2015-04-17 18:22 2.6MCompressed PSIBLAST output file
[TXT]jp_fDmWRH8.coils.csv2015-04-17 18:23 1.1KCOILS output in CSV format
[ ]jp_fDmWRH8.coilseq.lupas_142015-04-17 18:23 7.6KCOILS output, window length 14
[ ]jp_fDmWRH8.coilseq.lupas_212015-04-17 18:23 7.6KCOILS output, window length 21
[ ]jp_fDmWRH8.coilseq.lupas_282015-04-17 18:23 7.6KCOILS output, window length 28
[ ]jp_fDmWRH8.concise2015-04-17 18:23 278KPrediction: coiled-coil, solvent, alignment
[ ]jp_fDmWRH8.concise.blc2015-04-17 18:23 141KBLC format prediction and alignment data
[ ]jp_fDmWRH8.concise.fasta2015-04-17 18:23 142KPrediction: coiled-coil, solvent, alignment
[ ]jp_fDmWRH8.concise.pdf2015-04-17 18:23 853KPDF prediction and alignment data
[ ]jp_fDmWRH8.concise.ps2015-04-17 18:23 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_fDmWRH8.fasta2015-04-17 18:16 197 Input query sequence in FASTA format
[ ]jp_fDmWRH8.full_MSA.fasta2015-04-17 18:22 5.9MFull MSA before JPred filters in FASTA
[TXT]jp_fDmWRH8.full_MSA.fasta.noGaps.html2015-04-17 18:23 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_fDmWRH8.full_MSA.fasta.withGaps.html2015-04-17 18:23 23MFull MSA before JPred filters in FASTA
[ ]jp_fDmWRH8.hmm2015-04-17 18:23 34KHHMer2 profile of the alignment
[TXT]jp_fDmWRH8.html2015-04-17 18:23 290KHTML prediction and alignment data
[ ]jp_fDmWRH8.input2015-04-17 17:13 189 Raw input data for analysis
[ ]jp_fDmWRH8.jalview2015-04-17 18:23 4.4KJalview annotation file for alignment
[ ]jp_fDmWRH8.jnet2015-04-17 18:23 6.7KJnet secondary structure output
[TXT]jp_fDmWRH8.profile2015-04-17 18:21 29KPSIBLAST profile from alignment
[ ]jp_fDmWRH8.pssm2015-04-17 18:23 39KPSIBLAST PSSM for Jnet
[TXT]jp_fDmWRH8.results.html2016-02-15 12:17 82KJPred results page
[TXT]jp_fDmWRH8.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fDmWRH8.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fDmWRH8.seq2015-04-17 17:13 197 Sequence data file
[TXT]jp_fDmWRH8.simple.html2015-04-17 18:23 1.4KBrief HTML: sequence and prediction only
[TXT]jp_fDmWRH8.svg.html2015-04-17 18:23 73KJalview SVG summary of results
[ ]jp_fDmWRH8.tar.gz2015-04-17 18:23 5.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.