JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:59 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gwea_.name2015-04-17 15:20 0 Job name flag file
[ ]jp_Q8HqrDt.align2015-04-17 15:58 306KPSIBLAST alignment in FASTA format
[TXT]jp_Q8HqrDt.als2015-04-17 15:58 5.2KAlscript command file for PS/PDF output
[ ]jp_Q8HqrDt.blast.gz2015-04-17 15:56 7.9MCompressed PSIBLAST output file
[TXT]jp_Q8HqrDt.coils.csv2015-04-17 15:58 2.9KCOILS output in CSV format
[ ]jp_Q8HqrDt.coilseq.lupas_142015-04-17 15:58 21KCOILS output, window length 14
[ ]jp_Q8HqrDt.coilseq.lupas_212015-04-17 15:58 21KCOILS output, window length 21
[ ]jp_Q8HqrDt.coilseq.lupas_282015-04-17 15:58 21KCOILS output, window length 28
[ ]jp_Q8HqrDt.concise2015-04-17 15:58 619KPrediction: coiled-coil, solvent, alignment
[ ]jp_Q8HqrDt.concise.blc2015-04-17 15:58 309KBLC format prediction and alignment data
[ ]jp_Q8HqrDt.concise.fasta2015-04-17 15:58 311KPrediction: coiled-coil, solvent, alignment
[ ]jp_Q8HqrDt.concise.pdf2015-04-17 15:59 2.0MPDF prediction and alignment data
[ ]jp_Q8HqrDt.concise.ps2015-04-17 15:58 38MPrediction: coiled-coil, solvent, alignment
[ ]jp_Q8HqrDt.fasta2015-04-17 15:20 517 Input query sequence in FASTA format
[ ]jp_Q8HqrDt.full_MSA.fasta2015-04-17 15:57 14MFull MSA before JPred filters in FASTA
[TXT]jp_Q8HqrDt.full_MSA.fasta.noGaps.html2015-04-17 15:59 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_Q8HqrDt.full_MSA.fasta.withGaps.html2015-04-17 15:59 52MFull MSA before JPred filters in FASTA
[ ]jp_Q8HqrDt.hmm2015-04-17 15:58 93KHHMer2 profile of the alignment
[TXT]jp_Q8HqrDt.html2015-04-17 15:58 455KHTML prediction and alignment data
[ ]jp_Q8HqrDt.input2015-04-17 15:20 505 Raw input data for analysis
[ ]jp_Q8HqrDt.jalview2015-04-17 15:58 11KJalview annotation file for alignment
[ ]jp_Q8HqrDt.jnet2015-04-17 15:58 18KJnet secondary structure output
[TXT]jp_Q8HqrDt.profile2015-04-17 15:42 79KPSIBLAST profile from alignment
[ ]jp_Q8HqrDt.pssm2015-04-17 15:58 107KPSIBLAST PSSM for Jnet
[TXT]jp_Q8HqrDt.results.html2016-02-15 12:17 202KJPred results page
[TXT]jp_Q8HqrDt.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Q8HqrDt.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Q8HqrDt.seq2015-04-17 15:20 517 Sequence data file
[TXT]jp_Q8HqrDt.simple.html2015-04-17 15:58 2.5KBrief HTML: sequence and prediction only
[TXT]jp_Q8HqrDt.svg.html2015-04-17 15:59 194KJalview SVG summary of results
[ ]jp_Q8HqrDt.tar.gz2015-04-17 15:59 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.