JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:19 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gxma_.name2015-04-17 16:34 0 Job name flag file
[ ]jp_J8bXjy_.align2015-04-17 17:18 299KPSIBLAST alignment in FASTA format
[TXT]jp_J8bXjy_.als2015-04-17 17:18 3.7KAlscript command file for PS/PDF output
[ ]jp_J8bXjy_.blast.gz2015-04-17 17:17 1.4MCompressed PSIBLAST output file
[TXT]jp_J8bXjy_.coils.csv2015-04-17 17:18 1.9KCOILS output in CSV format
[ ]jp_J8bXjy_.coilseq.lupas_142015-04-17 17:18 14KCOILS output, window length 14
[ ]jp_J8bXjy_.coilseq.lupas_212015-04-17 17:18 14KCOILS output, window length 21
[ ]jp_J8bXjy_.coilseq.lupas_282015-04-17 17:18 14KCOILS output, window length 28
[ ]jp_J8bXjy_.concise2015-04-17 17:18 594KPrediction: coiled-coil, solvent, alignment
[ ]jp_J8bXjy_.concise.blc2015-04-17 17:18 299KBLC format prediction and alignment data
[ ]jp_J8bXjy_.concise.fasta2015-04-17 17:18 302KPrediction: coiled-coil, solvent, alignment
[ ]jp_J8bXjy_.concise.pdf2015-04-17 17:18 1.7MPDF prediction and alignment data
[ ]jp_J8bXjy_.concise.ps2015-04-17 17:18 35MPrediction: coiled-coil, solvent, alignment
[ ]jp_J8bXjy_.fasta2015-04-17 17:14 341 Input query sequence in FASTA format
[ ]jp_J8bXjy_.full_MSA.fasta2015-04-17 17:17 5.4MFull MSA before JPred filters in FASTA
[TXT]jp_J8bXjy_.full_MSA.fasta.noGaps.html2015-04-17 17:18 822KFull MSA before JPred filters in FASTA
[TXT]jp_J8bXjy_.full_MSA.fasta.withGaps.html2015-04-17 17:18 18MFull MSA before JPred filters in FASTA
[ ]jp_J8bXjy_.hmm2015-04-17 17:18 61KHHMer2 profile of the alignment
[TXT]jp_J8bXjy_.html2015-04-17 17:18 494KHTML prediction and alignment data
[ ]jp_J8bXjy_.input2015-04-17 16:34 331 Raw input data for analysis
[ ]jp_J8bXjy_.jalview2015-04-17 17:18 7.2KJalview annotation file for alignment
[ ]jp_J8bXjy_.jnet2015-04-17 17:18 12KJnet secondary structure output
[TXT]jp_J8bXjy_.profile2015-04-17 17:16 52KPSIBLAST profile from alignment
[ ]jp_J8bXjy_.pssm2015-04-17 17:18 70KPSIBLAST PSSM for Jnet
[TXT]jp_J8bXjy_.results.html2016-02-15 12:17 135KJPred results page
[TXT]jp_J8bXjy_.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_J8bXjy_.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_J8bXjy_.seq2015-04-17 16:34 341 Sequence data file
[TXT]jp_J8bXjy_.simple.html2015-04-17 17:18 1.9KBrief HTML: sequence and prediction only
[TXT]jp_J8bXjy_.svg.html2015-04-17 17:19 127KJalview SVG summary of results
[ ]jp_J8bXjy_.tar.gz2015-04-17 17:19 4.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.