JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:22 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1h4ra1.name2015-04-17 17:49 0 Job name flag file
[ ]jp_WKLNYyP.align2015-04-17 19:22 53KPSIBLAST alignment in FASTA format
[TXT]jp_WKLNYyP.als2015-04-17 19:22 1.8KAlscript command file for PS/PDF output
[ ]jp_WKLNYyP.blast.gz2015-04-17 19:21 1.9MCompressed PSIBLAST output file
[TXT]jp_WKLNYyP.coils.csv2015-04-17 19:22 696 COILS output in CSV format
[ ]jp_WKLNYyP.coilseq.lupas_142015-04-17 19:22 4.7KCOILS output, window length 14
[ ]jp_WKLNYyP.coilseq.lupas_212015-04-17 19:22 4.7KCOILS output, window length 21
[ ]jp_WKLNYyP.coilseq.lupas_282015-04-17 19:22 4.7KCOILS output, window length 28
[ ]jp_WKLNYyP.concise2015-04-17 19:22 106KPrediction: coiled-coil, solvent, alignment
[ ]jp_WKLNYyP.concise.blc2015-04-17 19:22 54KBLC format prediction and alignment data
[ ]jp_WKLNYyP.concise.fasta2015-04-17 19:22 54KPrediction: coiled-coil, solvent, alignment
[ ]jp_WKLNYyP.concise.pdf2015-04-17 19:22 361KPDF prediction and alignment data
[ ]jp_WKLNYyP.concise.ps2015-04-17 19:22 6.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_WKLNYyP.fasta2015-04-17 19:17 125 Input query sequence in FASTA format
[ ]jp_WKLNYyP.full_MSA.fasta2015-04-17 19:21 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_WKLNYyP.full_MSA.fasta.noGaps.html2015-04-17 19:22 943KFull MSA before JPred filters in FASTA
[TXT]jp_WKLNYyP.full_MSA.fasta.withGaps.html2015-04-17 19:22 13MFull MSA before JPred filters in FASTA
[ ]jp_WKLNYyP.hmm2015-04-17 19:22 21KHHMer2 profile of the alignment
[TXT]jp_WKLNYyP.html2015-04-17 19:22 145KHTML prediction and alignment data
[ ]jp_WKLNYyP.input2015-04-17 17:49 118 Raw input data for analysis
[ ]jp_WKLNYyP.jalview2015-04-17 19:22 3.1KJalview annotation file for alignment
[ ]jp_WKLNYyP.jnet2015-04-17 19:22 4.1KJnet secondary structure output
[TXT]jp_WKLNYyP.profile2015-04-17 19:20 18KPSIBLAST profile from alignment
[ ]jp_WKLNYyP.pssm2015-04-17 19:22 24KPSIBLAST PSSM for Jnet
[TXT]jp_WKLNYyP.results.html2016-02-15 12:17 53KJPred results page
[TXT]jp_WKLNYyP.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_WKLNYyP.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_WKLNYyP.seq2015-04-17 17:49 125 Sequence data file
[TXT]jp_WKLNYyP.simple.html2015-04-17 19:22 1.2KBrief HTML: sequence and prediction only
[TXT]jp_WKLNYyP.svg.html2015-04-17 19:22 45KJalview SVG summary of results
[ ]jp_WKLNYyP.tar.gz2015-04-17 19:22 3.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.