JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:24 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1hyoa1.name2015-04-17 17:14 0 Job name flag file
[ ]jp_qHU5omD.align2015-04-17 18:24 107KPSIBLAST alignment in FASTA format
[TXT]jp_qHU5omD.als2015-04-17 18:24 2.4KAlscript command file for PS/PDF output
[ ]jp_qHU5omD.blast.gz2015-04-17 18:23 506KCompressed PSIBLAST output file
[TXT]jp_qHU5omD.coils.csv2015-04-17 18:24 738 COILS output in CSV format
[ ]jp_qHU5omD.coilseq.lupas_142015-04-17 18:24 5.0KCOILS output, window length 14
[ ]jp_qHU5omD.coilseq.lupas_212015-04-17 18:24 5.0KCOILS output, window length 21
[ ]jp_qHU5omD.coilseq.lupas_282015-04-17 18:24 5.0KCOILS output, window length 28
[ ]jp_qHU5omD.concise2015-04-17 18:24 208KPrediction: coiled-coil, solvent, alignment
[ ]jp_qHU5omD.concise.blc2015-04-17 18:24 107KBLC format prediction and alignment data
[ ]jp_qHU5omD.concise.fasta2015-04-17 18:24 108KPrediction: coiled-coil, solvent, alignment
[ ]jp_qHU5omD.concise.pdf2015-04-17 18:24 736KPDF prediction and alignment data
[ ]jp_qHU5omD.concise.ps2015-04-17 18:24 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_qHU5omD.fasta2015-04-17 18:18 132 Input query sequence in FASTA format
[ ]jp_qHU5omD.full_MSA.fasta2015-04-17 18:23 630KFull MSA before JPred filters in FASTA
[TXT]jp_qHU5omD.full_MSA.fasta.noGaps.html2015-04-17 18:24 272KFull MSA before JPred filters in FASTA
[TXT]jp_qHU5omD.full_MSA.fasta.withGaps.html2015-04-17 18:24 2.7MFull MSA before JPred filters in FASTA
[ ]jp_qHU5omD.hmm2015-04-17 18:24 22KHHMer2 profile of the alignment
[TXT]jp_qHU5omD.html2015-04-17 18:24 270KHTML prediction and alignment data
[ ]jp_qHU5omD.input2015-04-17 17:14 125 Raw input data for analysis
[ ]jp_qHU5omD.jalview2015-04-17 18:24 3.2KJalview annotation file for alignment
[ ]jp_qHU5omD.jnet2015-04-17 18:24 4.4KJnet secondary structure output
[TXT]jp_qHU5omD.profile2015-04-17 18:21 19KPSIBLAST profile from alignment
[ ]jp_qHU5omD.pssm2015-04-17 18:24 25KPSIBLAST PSSM for Jnet
[TXT]jp_qHU5omD.results.html2016-02-15 12:17 58KJPred results page
[TXT]jp_qHU5omD.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_qHU5omD.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_qHU5omD.seq2015-04-17 17:14 132 Sequence data file
[TXT]jp_qHU5omD.simple.html2015-04-17 18:24 1.3KBrief HTML: sequence and prediction only
[TXT]jp_qHU5omD.svg.html2015-04-17 18:24 50KJalview SVG summary of results
[ ]jp_qHU5omD.tar.gz2015-04-17 18:24 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.