JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:37 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1io0a_.name2015-04-17 19:01 0 Job name flag file
[ ]jp_l8xY1ZR.align2015-04-17 21:33 171KPSIBLAST alignment in FASTA format
[TXT]jp_l8xY1ZR.als2015-04-17 21:33 3.0KAlscript command file for PS/PDF output
[ ]jp_l8xY1ZR.blast.gz2015-04-17 21:26 47MCompressed PSIBLAST output file
[TXT]jp_l8xY1ZR.coils.csv2015-04-17 21:33 1.0KCOILS output in CSV format
[ ]jp_l8xY1ZR.coilseq.lupas_142015-04-17 21:33 7.0KCOILS output, window length 14
[ ]jp_l8xY1ZR.coilseq.lupas_212015-04-17 21:33 7.0KCOILS output, window length 21
[ ]jp_l8xY1ZR.coilseq.lupas_282015-04-17 21:33 7.0KCOILS output, window length 28
[ ]jp_l8xY1ZR.concise2015-04-17 21:33 334KPrediction: coiled-coil, solvent, alignment
[ ]jp_l8xY1ZR.concise.blc2015-04-17 21:33 171KBLC format prediction and alignment data
[ ]jp_l8xY1ZR.concise.fasta2015-04-17 21:33 173KPrediction: coiled-coil, solvent, alignment
[ ]jp_l8xY1ZR.concise.pdf2015-04-17 21:34 1.2MPDF prediction and alignment data
[ ]jp_l8xY1ZR.concise.ps2015-04-17 21:33 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_l8xY1ZR.fasta2015-04-17 21:15 181 Input query sequence in FASTA format
[ ]jp_l8xY1ZR.full_MSA.fasta2015-04-17 21:31 159MFull MSA before JPred filters in FASTA
[TXT]jp_l8xY1ZR.full_MSA.fasta.noGaps.html2015-04-17 21:37 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_l8xY1ZR.full_MSA.fasta.withGaps.html2015-04-17 21:37 291MFull MSA before JPred filters in FASTA
[ ]jp_l8xY1ZR.hmm2015-04-17 21:33 31KHHMer2 profile of the alignment
[TXT]jp_l8xY1ZR.html2015-04-17 21:33 366KHTML prediction and alignment data
[ ]jp_l8xY1ZR.input2015-04-17 19:01 173 Raw input data for analysis
[ ]jp_l8xY1ZR.jalview2015-04-17 21:33 4.2KJalview annotation file for alignment
[ ]jp_l8xY1ZR.jnet2015-04-17 21:33 6.1KJnet secondary structure output
[TXT]jp_l8xY1ZR.profile2015-04-17 21:23 27KPSIBLAST profile from alignment
[ ]jp_l8xY1ZR.pssm2015-04-17 21:33 36KPSIBLAST PSSM for Jnet
[TXT]jp_l8xY1ZR.results.html2016-02-15 12:17 77KJPred results page
[TXT]jp_l8xY1ZR.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_l8xY1ZR.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_l8xY1ZR.seq2015-04-17 19:01 181 Sequence data file
[TXT]jp_l8xY1ZR.simple.html2015-04-17 21:33 1.5KBrief HTML: sequence and prediction only
[TXT]jp_l8xY1ZR.svg.html2015-04-17 21:37 69KJalview SVG summary of results
[ ]jp_l8xY1ZR.tar.gz2015-04-17 21:38 72MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.