JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:20 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jlya1.name2015-04-17 16:36 0 Job name flag file
[ ]jp_wYd5ZQ7.align2015-04-17 17:20 18KPSIBLAST alignment in FASTA format
[TXT]jp_wYd5ZQ7.als2015-04-17 17:20 3.1KAlscript command file for PS/PDF output
[ ]jp_wYd5ZQ7.blast.gz2015-04-17 17:20 41KCompressed PSIBLAST output file
[TXT]jp_wYd5ZQ7.coils.csv2015-04-17 17:20 948 COILS output in CSV format
[ ]jp_wYd5ZQ7.coilseq.lupas_142015-04-17 17:20 6.4KCOILS output, window length 14
[ ]jp_wYd5ZQ7.coilseq.lupas_212015-04-17 17:20 6.4KCOILS output, window length 21
[ ]jp_wYd5ZQ7.coilseq.lupas_282015-04-17 17:20 6.4KCOILS output, window length 28
[ ]jp_wYd5ZQ7.concise2015-04-17 17:20 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_wYd5ZQ7.concise.blc2015-04-17 17:20 20KBLC format prediction and alignment data
[ ]jp_wYd5ZQ7.concise.fasta2015-04-17 17:20 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_wYd5ZQ7.concise.pdf2015-04-17 17:20 119KPDF prediction and alignment data
[ ]jp_wYd5ZQ7.concise.ps2015-04-17 17:20 2.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_wYd5ZQ7.fasta2015-04-17 17:18 168 Input query sequence in FASTA format
[ ]jp_wYd5ZQ7.full_MSA.fasta2015-04-17 17:20 55KFull MSA before JPred filters in FASTA
[TXT]jp_wYd5ZQ7.full_MSA.fasta.noGaps.html2015-04-17 17:20 37KFull MSA before JPred filters in FASTA
[TXT]jp_wYd5ZQ7.full_MSA.fasta.withGaps.html2015-04-17 17:20 298KFull MSA before JPred filters in FASTA
[ ]jp_wYd5ZQ7.hmm2015-04-17 17:20 29KHHMer2 profile of the alignment
[TXT]jp_wYd5ZQ7.html2015-04-17 17:20 53KHTML prediction and alignment data
[ ]jp_wYd5ZQ7.input2015-04-17 16:36 160 Raw input data for analysis
[ ]jp_wYd5ZQ7.jalview2015-04-17 17:20 3.8KJalview annotation file for alignment
[ ]jp_wYd5ZQ7.jnet2015-04-17 17:20 5.6KJnet secondary structure output
[TXT]jp_wYd5ZQ7.profile2015-04-17 17:19 25KPSIBLAST profile from alignment
[ ]jp_wYd5ZQ7.pssm2015-04-17 17:20 33KPSIBLAST PSSM for Jnet
[TXT]jp_wYd5ZQ7.results.html2016-02-15 12:17 70KJPred results page
[TXT]jp_wYd5ZQ7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_wYd5ZQ7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_wYd5ZQ7.seq2015-04-17 16:36 168 Sequence data file
[TXT]jp_wYd5ZQ7.simple.html2015-04-17 17:20 1.5KBrief HTML: sequence and prediction only
[TXT]jp_wYd5ZQ7.svg.html2015-04-17 17:20 62KJalview SVG summary of results
[ ]jp_wYd5ZQ7.tar.gz2015-04-17 17:20 260KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.