JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:01 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jmma_.name2015-04-17 15:44 0 Job name flag file
[ ]jp_US3JH3y.align2015-04-17 16:00 62KPSIBLAST alignment in FASTA format
[TXT]jp_US3JH3y.als2015-04-17 16:01 4.4KAlscript command file for PS/PDF output
[ ]jp_US3JH3y.blast.gz2015-04-17 16:00 245KCompressed PSIBLAST output file
[TXT]jp_US3JH3y.coils.csv2015-04-17 16:00 2.2KCOILS output in CSV format
[ ]jp_US3JH3y.coilseq.lupas_142015-04-17 16:00 16KCOILS output, window length 14
[ ]jp_US3JH3y.coilseq.lupas_212015-04-17 16:00 16KCOILS output, window length 21
[ ]jp_US3JH3y.coilseq.lupas_282015-04-17 16:00 16KCOILS output, window length 28
[ ]jp_US3JH3y.concise2015-04-17 16:00 136KPrediction: coiled-coil, solvent, alignment
[ ]jp_US3JH3y.concise.blc2015-04-17 16:01 66KBLC format prediction and alignment data
[ ]jp_US3JH3y.concise.fasta2015-04-17 16:00 65KPrediction: coiled-coil, solvent, alignment
[ ]jp_US3JH3y.concise.pdf2015-04-17 16:01 397KPDF prediction and alignment data
[ ]jp_US3JH3y.concise.ps2015-04-17 16:01 7.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_US3JH3y.fasta2015-04-17 15:57 395 Input query sequence in FASTA format
[ ]jp_US3JH3y.full_MSA.fasta2015-04-17 16:00 558KFull MSA before JPred filters in FASTA
[TXT]jp_US3JH3y.full_MSA.fasta.noGaps.html2015-04-17 16:01 162KFull MSA before JPred filters in FASTA
[TXT]jp_US3JH3y.full_MSA.fasta.withGaps.html2015-04-17 16:01 2.0MFull MSA before JPred filters in FASTA
[ ]jp_US3JH3y.hmm2015-04-17 16:00 71KHHMer2 profile of the alignment
[TXT]jp_US3JH3y.html2015-04-17 16:00 118KHTML prediction and alignment data
[ ]jp_US3JH3y.input2015-04-17 15:44 384 Raw input data for analysis
[ ]jp_US3JH3y.jalview2015-04-17 16:00 8.2KJalview annotation file for alignment
[ ]jp_US3JH3y.jnet2015-04-17 16:00 14KJnet secondary structure output
[TXT]jp_US3JH3y.profile2015-04-17 15:59 60KPSIBLAST profile from alignment
[ ]jp_US3JH3y.pssm2015-04-17 16:00 81KPSIBLAST PSSM for Jnet
[TXT]jp_US3JH3y.results.html2016-02-15 12:17 152KJPred results page
[TXT]jp_US3JH3y.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_US3JH3y.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_US3JH3y.seq2015-04-17 15:44 395 Sequence data file
[TXT]jp_US3JH3y.simple.html2015-04-17 16:00 2.1KBrief HTML: sequence and prediction only
[TXT]jp_US3JH3y.svg.html2015-04-17 16:01 144KJalview SVG summary of results
[ ]jp_US3JH3y.tar.gz2015-04-17 16:01 943KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.