JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:42 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1kjqa3.name2015-04-17 17:50 0 Job name flag file
[ ]jp_UwzjqYG.align2015-04-17 19:41 155KPSIBLAST alignment in FASTA format
[TXT]jp_UwzjqYG.als2015-04-17 19:41 3.5KAlscript command file for PS/PDF output
[ ]jp_UwzjqYG.blast.gz2015-04-17 19:39 10MCompressed PSIBLAST output file
[TXT]jp_UwzjqYG.coils.csv2015-04-17 19:41 1.2KCOILS output in CSV format
[ ]jp_UwzjqYG.coilseq.lupas_142015-04-17 19:41 8.5KCOILS output, window length 14
[ ]jp_UwzjqYG.coilseq.lupas_212015-04-17 19:41 8.5KCOILS output, window length 21
[ ]jp_UwzjqYG.coilseq.lupas_282015-04-17 19:41 8.5KCOILS output, window length 28
[ ]jp_UwzjqYG.concise2015-04-17 19:41 308KPrediction: coiled-coil, solvent, alignment
[ ]jp_UwzjqYG.concise.blc2015-04-17 19:41 156KBLC format prediction and alignment data
[ ]jp_UwzjqYG.concise.fasta2015-04-17 19:41 157KPrediction: coiled-coil, solvent, alignment
[ ]jp_UwzjqYG.concise.pdf2015-04-17 19:41 1.1MPDF prediction and alignment data
[ ]jp_UwzjqYG.concise.ps2015-04-17 19:41 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_UwzjqYG.fasta2015-04-17 19:21 218 Input query sequence in FASTA format
[ ]jp_UwzjqYG.full_MSA.fasta2015-04-17 19:40 21MFull MSA before JPred filters in FASTA
[TXT]jp_UwzjqYG.full_MSA.fasta.noGaps.html2015-04-17 19:42 4.0MFull MSA before JPred filters in FASTA
[TXT]jp_UwzjqYG.full_MSA.fasta.withGaps.html2015-04-17 19:42 75MFull MSA before JPred filters in FASTA
[ ]jp_UwzjqYG.hmm2015-04-17 19:41 38KHHMer2 profile of the alignment
[TXT]jp_UwzjqYG.html2015-04-17 19:41 312KHTML prediction and alignment data
[ ]jp_UwzjqYG.input2015-04-17 17:50 210 Raw input data for analysis
[ ]jp_UwzjqYG.jalview2015-04-17 19:41 4.9KJalview annotation file for alignment
[ ]jp_UwzjqYG.jnet2015-04-17 19:41 7.4KJnet secondary structure output
[TXT]jp_UwzjqYG.profile2015-04-17 19:35 33KPSIBLAST profile from alignment
[ ]jp_UwzjqYG.pssm2015-04-17 19:41 44KPSIBLAST PSSM for Jnet
[TXT]jp_UwzjqYG.results.html2016-02-15 12:17 91KJPred results page
[TXT]jp_UwzjqYG.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_UwzjqYG.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_UwzjqYG.seq2015-04-17 17:50 218 Sequence data file
[TXT]jp_UwzjqYG.simple.html2015-04-17 19:41 1.6KBrief HTML: sequence and prediction only
[TXT]jp_UwzjqYG.svg.html2015-04-17 19:42 83KJalview SVG summary of results
[ ]jp_UwzjqYG.tar.gz2015-04-17 19:42 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.