JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_MbWaUvG.als2015-04-17 16:29 3.7KAlscript command file for PS/PDF output
[ ]jp_MbWaUvG.tar.gz2015-04-17 16:30 5.8MArchive containing complete results
[ ]jp_MbWaUvG.concise.blc2015-04-17 16:29 178KBLC format prediction and alignment data
[TXT]jp_MbWaUvG.simple.html2015-04-17 16:29 1.8KBrief HTML: sequence and prediction only
[TXT]jp_MbWaUvG.coils.csv2015-04-17 16:29 1.5KCOILS output in CSV format
[ ]jp_MbWaUvG.coilseq.lupas_142015-04-17 16:29 10KCOILS output, window length 14
[ ]jp_MbWaUvG.coilseq.lupas_212015-04-17 16:29 10KCOILS output, window length 21
[ ]jp_MbWaUvG.coilseq.lupas_282015-04-17 16:29 10KCOILS output, window length 28
[ ]jp_MbWaUvG.blast.gz2015-04-17 16:28 2.6MCompressed PSIBLAST output file
[ ]jp_MbWaUvG.full_MSA.fasta2015-04-17 16:29 4.0MFull MSA before JPred filters in FASTA
[TXT]jp_MbWaUvG.full_MSA.fasta.noGaps.html2015-04-17 16:30 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_MbWaUvG.full_MSA.fasta.withGaps.html2015-04-17 16:30 17MFull MSA before JPred filters in FASTA
[ ]jp_MbWaUvG.hmm2015-04-17 16:29 46KHHMer2 profile of the alignment
[TXT]jp_MbWaUvG.html2015-04-17 16:29 331KHTML prediction and alignment data
[TXT]jp_MbWaUvG.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_MbWaUvG.fasta2015-04-17 15:24 259 Input query sequence in FASTA format
[TXT]jp_MbWaUvG.results.html2016-02-15 12:17 107KJPred results page
[TXT]LOG2015-04-17 16:30 4.7KJPred server log file
[TXT]jp_MbWaUvG.svg.html2015-04-17 16:30 99KJalview SVG summary of results
[ ]jp_MbWaUvG.jalview2015-04-17 16:29 5.7KJalview annotation file for alignment
[TXT]jp_MbWaUvG.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_MbWaUvG.jnet2015-04-17 16:29 8.9KJnet secondary structure output
[TXT]d1lfpa_.name2015-04-17 15:24 0 Job name flag file
[ ]jp_MbWaUvG.concise.pdf2015-04-17 16:30 1.2MPDF prediction and alignment data
[ ]jp_MbWaUvG.pssm2015-04-17 16:29 52KPSIBLAST PSSM for Jnet
[ ]jp_MbWaUvG.align2015-04-17 16:29 177KPSIBLAST alignment in FASTA format
[TXT]jp_MbWaUvG.profile2015-04-17 16:21 39KPSIBLAST profile from alignment
[ ]jp_MbWaUvG.concise2015-04-17 16:29 353KPrediction: coiled-coil, solvent, alignment
[ ]jp_MbWaUvG.concise.fasta2015-04-17 16:29 180KPrediction: coiled-coil, solvent, alignment
[ ]jp_MbWaUvG.concise.ps2015-04-17 16:29 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_MbWaUvG.input2015-04-17 15:24 250 Raw input data for analysis
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_MbWaUvG.seq2015-04-17 15:24 259 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.