JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:32 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1m6ya1.name2015-04-17 19:05 0 Job name flag file
[ ]jp_9eu5yv_.align2015-04-17 21:32 100KPSIBLAST alignment in FASTA format
[TXT]jp_9eu5yv_.als2015-04-17 21:32 2.0KAlscript command file for PS/PDF output
[ ]jp_9eu5yv_.blast.gz2015-04-17 21:31 1.8MCompressed PSIBLAST output file
[TXT]jp_9eu5yv_.coils.csv2015-04-17 21:32 636 COILS output in CSV format
[ ]jp_9eu5yv_.coilseq.lupas_142015-04-17 21:32 4.2KCOILS output, window length 14
[ ]jp_9eu5yv_.coilseq.lupas_212015-04-17 21:32 4.2KCOILS output, window length 21
[ ]jp_9eu5yv_.coilseq.lupas_282015-04-17 21:32 4.2KCOILS output, window length 28
[ ]jp_9eu5yv_.concise2015-04-17 21:32 194KPrediction: coiled-coil, solvent, alignment
[ ]jp_9eu5yv_.concise.blc2015-04-17 21:32 100KBLC format prediction and alignment data
[ ]jp_9eu5yv_.concise.fasta2015-04-17 21:32 102KPrediction: coiled-coil, solvent, alignment
[ ]jp_9eu5yv_.concise.pdf2015-04-17 21:32 604KPDF prediction and alignment data
[ ]jp_9eu5yv_.concise.ps2015-04-17 21:32 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_9eu5yv_.fasta2015-04-17 21:24 115 Input query sequence in FASTA format
[ ]jp_9eu5yv_.full_MSA.fasta2015-04-17 21:31 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_9eu5yv_.full_MSA.fasta.noGaps.html2015-04-17 21:32 888KFull MSA before JPred filters in FASTA
[TXT]jp_9eu5yv_.full_MSA.fasta.withGaps.html2015-04-17 21:32 9.4MFull MSA before JPred filters in FASTA
[ ]jp_9eu5yv_.hmm2015-04-17 21:32 19KHHMer2 profile of the alignment
[TXT]jp_9eu5yv_.html2015-04-17 21:32 274KHTML prediction and alignment data
[ ]jp_9eu5yv_.input2015-04-17 19:05 108 Raw input data for analysis
[ ]jp_9eu5yv_.jalview2015-04-17 21:32 2.8KJalview annotation file for alignment
[ ]jp_9eu5yv_.jnet2015-04-17 21:32 3.8KJnet secondary structure output
[TXT]jp_9eu5yv_.profile2015-04-17 21:29 16KPSIBLAST profile from alignment
[ ]jp_9eu5yv_.pssm2015-04-17 21:32 22KPSIBLAST PSSM for Jnet
[TXT]jp_9eu5yv_.results.html2016-02-15 12:17 50KJPred results page
[TXT]jp_9eu5yv_.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_9eu5yv_.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_9eu5yv_.seq2015-04-17 19:05 115 Sequence data file
[TXT]jp_9eu5yv_.simple.html2015-04-17 21:32 1.2KBrief HTML: sequence and prediction only
[TXT]jp_9eu5yv_.svg.html2015-04-17 21:32 42KJalview SVG summary of results
[ ]jp_9eu5yv_.tar.gz2015-04-17 21:32 3.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.