JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:26 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mg4a_.name2015-04-17 16:01 0 Job name flag file
[ ]jp_lAR4Xlo.align2015-04-17 16:26 81KPSIBLAST alignment in FASTA format
[TXT]jp_lAR4Xlo.als2015-04-17 16:26 2.0KAlscript command file for PS/PDF output
[ ]jp_lAR4Xlo.blast.gz2015-04-17 16:24 399KCompressed PSIBLAST output file
[TXT]jp_lAR4Xlo.coils.csv2015-04-17 16:26 636 COILS output in CSV format
[ ]jp_lAR4Xlo.coilseq.lupas_142015-04-17 16:26 4.2KCOILS output, window length 14
[ ]jp_lAR4Xlo.coilseq.lupas_212015-04-17 16:26 4.2KCOILS output, window length 21
[ ]jp_lAR4Xlo.coilseq.lupas_282015-04-17 16:26 4.2KCOILS output, window length 28
[ ]jp_lAR4Xlo.concise2015-04-17 16:26 156KPrediction: coiled-coil, solvent, alignment
[ ]jp_lAR4Xlo.concise.blc2015-04-17 16:26 81KBLC format prediction and alignment data
[ ]jp_lAR4Xlo.concise.fasta2015-04-17 16:26 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_lAR4Xlo.concise.pdf2015-04-17 16:26 466KPDF prediction and alignment data
[ ]jp_lAR4Xlo.concise.ps2015-04-17 16:26 8.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_lAR4Xlo.fasta2015-04-17 16:21 115 Input query sequence in FASTA format
[ ]jp_lAR4Xlo.full_MSA.fasta2015-04-17 16:24 848KFull MSA before JPred filters in FASTA
[TXT]jp_lAR4Xlo.full_MSA.fasta.noGaps.html2015-04-17 16:26 434KFull MSA before JPred filters in FASTA
[TXT]jp_lAR4Xlo.full_MSA.fasta.withGaps.html2015-04-17 16:26 3.8MFull MSA before JPred filters in FASTA
[ ]jp_lAR4Xlo.hmm2015-04-17 16:26 19KHHMer2 profile of the alignment
[TXT]jp_lAR4Xlo.html2015-04-17 16:26 219KHTML prediction and alignment data
[ ]jp_lAR4Xlo.input2015-04-17 16:01 108 Raw input data for analysis
[ ]jp_lAR4Xlo.jalview2015-04-17 16:26 2.8KJalview annotation file for alignment
[ ]jp_lAR4Xlo.jnet2015-04-17 16:26 3.8KJnet secondary structure output
[TXT]jp_lAR4Xlo.profile2015-04-17 16:22 16KPSIBLAST profile from alignment
[ ]jp_lAR4Xlo.pssm2015-04-17 16:26 22KPSIBLAST PSSM for Jnet
[TXT]jp_lAR4Xlo.results.html2016-02-15 12:17 49KJPred results page
[TXT]jp_lAR4Xlo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_lAR4Xlo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_lAR4Xlo.seq2015-04-17 16:01 115 Sequence data file
[TXT]jp_lAR4Xlo.simple.html2015-04-17 16:26 1.2KBrief HTML: sequence and prediction only
[TXT]jp_lAR4Xlo.svg.html2015-04-17 16:26 41KJalview SVG summary of results
[ ]jp_lAR4Xlo.tar.gz2015-04-17 16:26 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.