JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:29 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mlaa2.name2015-04-17 17:16 0 Job name flag file
[ ]jp_X0go7Ke.align2015-04-17 18:29 78KPSIBLAST alignment in FASTA format
[TXT]jp_X0go7Ke.als2015-04-17 18:29 2.1KAlscript command file for PS/PDF output
[ ]jp_X0go7Ke.blast.gz2015-04-17 18:28 1.6MCompressed PSIBLAST output file
[TXT]jp_X0go7Ke.coils.csv2015-04-17 18:29 450 COILS output in CSV format
[ ]jp_X0go7Ke.coilseq.lupas_142015-04-17 18:29 2.9KCOILS output, window length 14
[ ]jp_X0go7Ke.coilseq.lupas_212015-04-17 18:29 2.9KCOILS output, window length 21
[ ]jp_X0go7Ke.coilseq.lupas_282015-04-17 18:29 2.9KCOILS output, window length 28
[ ]jp_X0go7Ke.concise2015-04-17 18:29 150KPrediction: coiled-coil, solvent, alignment
[ ]jp_X0go7Ke.concise.blc2015-04-17 18:29 79KBLC format prediction and alignment data
[ ]jp_X0go7Ke.concise.fasta2015-04-17 18:29 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_X0go7Ke.concise.pdf2015-04-17 18:29 480KPDF prediction and alignment data
[ ]jp_X0go7Ke.concise.ps2015-04-17 18:29 8.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_X0go7Ke.fasta2015-04-17 18:23 83 Input query sequence in FASTA format
[ ]jp_X0go7Ke.full_MSA.fasta2015-04-17 18:28 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_X0go7Ke.full_MSA.fasta.noGaps.html2015-04-17 18:29 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_X0go7Ke.full_MSA.fasta.withGaps.html2015-04-17 18:29 15MFull MSA before JPred filters in FASTA
[ ]jp_X0go7Ke.hmm2015-04-17 18:29 13KHHMer2 profile of the alignment
[TXT]jp_X0go7Ke.html2015-04-17 18:29 261KHTML prediction and alignment data
[ ]jp_X0go7Ke.input2015-04-17 17:16 77 Raw input data for analysis
[ ]jp_X0go7Ke.jalview2015-04-17 18:29 2.2KJalview annotation file for alignment
[ ]jp_X0go7Ke.jnet2015-04-17 18:29 2.6KJnet secondary structure output
[TXT]jp_X0go7Ke.profile2015-04-17 18:26 12KPSIBLAST profile from alignment
[ ]jp_X0go7Ke.pssm2015-04-17 18:29 15KPSIBLAST PSSM for Jnet
[TXT]jp_X0go7Ke.results.html2016-02-15 12:17 39KJPred results page
[TXT]jp_X0go7Ke.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_X0go7Ke.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_X0go7Ke.seq2015-04-17 17:16 83 Sequence data file
[TXT]jp_X0go7Ke.simple.html2015-04-17 18:29 1.1KBrief HTML: sequence and prediction only
[TXT]jp_X0go7Ke.svg.html2015-04-17 18:29 31KJalview SVG summary of results
[ ]jp_X0go7Ke.tar.gz2015-04-17 18:29 3.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.