JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:47 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1n62b2.name2015-04-17 16:02 0 Job name flag file
[ ]jp_Rwl0Fg7.align2015-04-17 16:45 388KPSIBLAST alignment in FASTA format
[TXT]jp_Rwl0Fg7.als2015-04-17 16:45 7.0KAlscript command file for PS/PDF output
[ ]jp_Rwl0Fg7.blast.gz2015-04-17 16:41 32MCompressed PSIBLAST output file
[TXT]jp_Rwl0Fg7.coils.csv2015-04-17 16:45 3.9KCOILS output in CSV format
[ ]jp_Rwl0Fg7.coilseq.lupas_142015-04-17 16:45 28KCOILS output, window length 14
[ ]jp_Rwl0Fg7.coilseq.lupas_212015-04-17 16:45 28KCOILS output, window length 21
[ ]jp_Rwl0Fg7.coilseq.lupas_282015-04-17 16:45 28KCOILS output, window length 28
[ ]jp_Rwl0Fg7.concise2015-04-17 16:45 787KPrediction: coiled-coil, solvent, alignment
[ ]jp_Rwl0Fg7.concise.blc2015-04-17 16:45 392KBLC format prediction and alignment data
[ ]jp_Rwl0Fg7.concise.fasta2015-04-17 16:45 395KPrediction: coiled-coil, solvent, alignment
[ ]jp_Rwl0Fg7.concise.pdf2015-04-17 16:46 2.9MPDF prediction and alignment data
[ ]jp_Rwl0Fg7.concise.ps2015-04-17 16:45 51MPrediction: coiled-coil, solvent, alignment
[ ]jp_Rwl0Fg7.fasta2015-04-17 16:22 685 Input query sequence in FASTA format
[ ]jp_Rwl0Fg7.full_MSA.fasta2015-04-17 16:44 55MFull MSA before JPred filters in FASTA
[TXT]jp_Rwl0Fg7.full_MSA.fasta.noGaps.html2015-04-17 16:47 6.6MFull MSA before JPred filters in FASTA
[TXT]jp_Rwl0Fg7.full_MSA.fasta.withGaps.html2015-04-17 16:47 172MFull MSA before JPred filters in FASTA
[ ]jp_Rwl0Fg7.hmm2015-04-17 16:45 124KHHMer2 profile of the alignment
[TXT]jp_Rwl0Fg7.html2015-04-17 16:45 553KHTML prediction and alignment data
[ ]jp_Rwl0Fg7.input2015-04-17 16:02 670 Raw input data for analysis
[ ]jp_Rwl0Fg7.jalview2015-04-17 16:45 14KJalview annotation file for alignment
[ ]jp_Rwl0Fg7.jnet2015-04-17 16:45 24KJnet secondary structure output
[TXT]jp_Rwl0Fg7.profile2015-04-17 16:39 105KPSIBLAST profile from alignment
[ ]jp_Rwl0Fg7.pssm2015-04-17 16:45 142KPSIBLAST PSSM for Jnet
[TXT]jp_Rwl0Fg7.results.html2016-02-15 12:17 267KJPred results page
[TXT]jp_Rwl0Fg7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Rwl0Fg7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Rwl0Fg7.seq2015-04-17 16:02 685 Sequence data file
[TXT]jp_Rwl0Fg7.simple.html2015-04-17 16:45 3.1KBrief HTML: sequence and prediction only
[TXT]jp_Rwl0Fg7.svg.html2015-04-17 16:47 259KJalview SVG summary of results
[ ]jp_Rwl0Fg7.tar.gz2015-04-17 16:48 53MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.