JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1nwza_.name2015-04-17 16:03 0 Job name flag file
[ ]jp_dxIEmKy.align2015-04-17 16:28 95KPSIBLAST alignment in FASTA format
[TXT]jp_dxIEmKy.als2015-04-17 16:28 2.9KAlscript command file for PS/PDF output
[ ]jp_dxIEmKy.blast.gz2015-04-17 16:27 1.8MCompressed PSIBLAST output file
[TXT]jp_dxIEmKy.coils.csv2015-04-17 16:28 780 COILS output in CSV format
[ ]jp_dxIEmKy.coilseq.lupas_142015-04-17 16:28 5.2KCOILS output, window length 14
[ ]jp_dxIEmKy.coilseq.lupas_212015-04-17 16:28 5.2KCOILS output, window length 21
[ ]jp_dxIEmKy.coilseq.lupas_282015-04-17 16:28 5.2KCOILS output, window length 28
[ ]jp_dxIEmKy.concise2015-04-17 16:28 187KPrediction: coiled-coil, solvent, alignment
[ ]jp_dxIEmKy.concise.blc2015-04-17 16:28 96KBLC format prediction and alignment data
[ ]jp_dxIEmKy.concise.fasta2015-04-17 16:28 97KPrediction: coiled-coil, solvent, alignment
[ ]jp_dxIEmKy.concise.pdf2015-04-17 16:28 578KPDF prediction and alignment data
[ ]jp_dxIEmKy.concise.ps2015-04-17 16:28 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_dxIEmKy.fasta2015-04-17 16:24 139 Input query sequence in FASTA format
[ ]jp_dxIEmKy.full_MSA.fasta2015-04-17 16:28 7.3MFull MSA before JPred filters in FASTA
[TXT]jp_dxIEmKy.full_MSA.fasta.noGaps.html2015-04-17 16:28 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_dxIEmKy.full_MSA.fasta.withGaps.html2015-04-17 16:28 26MFull MSA before JPred filters in FASTA
[ ]jp_dxIEmKy.hmm2015-04-17 16:28 23KHHMer2 profile of the alignment
[TXT]jp_dxIEmKy.html2015-04-17 16:28 237KHTML prediction and alignment data
[ ]jp_dxIEmKy.input2015-04-17 16:03 132 Raw input data for analysis
[ ]jp_dxIEmKy.jalview2015-04-17 16:28 3.4KJalview annotation file for alignment
[ ]jp_dxIEmKy.jnet2015-04-17 16:28 4.6KJnet secondary structure output
[TXT]jp_dxIEmKy.profile2015-04-17 16:26 20KPSIBLAST profile from alignment
[ ]jp_dxIEmKy.pssm2015-04-17 16:28 27KPSIBLAST PSSM for Jnet
[TXT]jp_dxIEmKy.results.html2016-02-15 12:17 62KJPred results page
[TXT]jp_dxIEmKy.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_dxIEmKy.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_dxIEmKy.seq2015-04-17 16:03 139 Sequence data file
[TXT]jp_dxIEmKy.simple.html2015-04-17 16:28 1.4KBrief HTML: sequence and prediction only
[TXT]jp_dxIEmKy.svg.html2015-04-17 16:28 54KJalview SVG summary of results
[ ]jp_dxIEmKy.tar.gz2015-04-17 16:28 4.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.