JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:44 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o2da_.name2015-04-17 15:25 0 Job name flag file
[ ]jp_fZdELbL.align2015-04-17 15:43 352KPSIBLAST alignment in FASTA format
[TXT]jp_fZdELbL.als2015-04-17 15:43 5.0KAlscript command file for PS/PDF output
[ ]jp_fZdELbL.blast.gz2015-04-17 15:39 21MCompressed PSIBLAST output file
[TXT]jp_fZdELbL.coils.csv2015-04-17 15:43 2.1KCOILS output in CSV format
[ ]jp_fZdELbL.coilseq.lupas_142015-04-17 15:43 15KCOILS output, window length 14
[ ]jp_fZdELbL.coilseq.lupas_212015-04-17 15:43 15KCOILS output, window length 21
[ ]jp_fZdELbL.coilseq.lupas_282015-04-17 15:43 15KCOILS output, window length 28
[ ]jp_fZdELbL.concise2015-04-17 15:43 700KPrediction: coiled-coil, solvent, alignment
[ ]jp_fZdELbL.concise.blc2015-04-17 15:43 352KBLC format prediction and alignment data
[ ]jp_fZdELbL.concise.fasta2015-04-17 15:43 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_fZdELbL.concise.pdf2015-04-17 15:43 2.6MPDF prediction and alignment data
[ ]jp_fZdELbL.concise.ps2015-04-17 15:43 46MPrediction: coiled-coil, solvent, alignment
[ ]jp_fZdELbL.fasta2015-04-17 15:25 375 Input query sequence in FASTA format
[ ]jp_fZdELbL.full_MSA.fasta2015-04-17 15:41 33MFull MSA before JPred filters in FASTA
[TXT]jp_fZdELbL.full_MSA.fasta.noGaps.html2015-04-17 15:44 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_fZdELbL.full_MSA.fasta.withGaps.html2015-04-17 15:44 92MFull MSA before JPred filters in FASTA
[ ]jp_fZdELbL.hmm2015-04-17 15:43 67KHHMer2 profile of the alignment
[TXT]jp_fZdELbL.html2015-04-17 15:43 567KHTML prediction and alignment data
[ ]jp_fZdELbL.input2015-04-17 15:25 365 Raw input data for analysis
[ ]jp_fZdELbL.jalview2015-04-17 15:43 8.1KJalview annotation file for alignment
[ ]jp_fZdELbL.jnet2015-04-17 15:43 13KJnet secondary structure output
[TXT]jp_fZdELbL.profile2015-04-17 15:38 57KPSIBLAST profile from alignment
[ ]jp_fZdELbL.pssm2015-04-17 15:43 77KPSIBLAST PSSM for Jnet
[TXT]jp_fZdELbL.results.html2016-02-15 12:17 153KJPred results page
[TXT]jp_fZdELbL.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fZdELbL.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fZdELbL.seq2015-04-17 15:25 375 Sequence data file
[TXT]jp_fZdELbL.simple.html2015-04-17 15:43 2.2KBrief HTML: sequence and prediction only
[TXT]jp_fZdELbL.svg.html2015-04-17 15:44 145KJalview SVG summary of results
[ ]jp_fZdELbL.tar.gz2015-04-17 15:44 35MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.