JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:11 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o7qa_.name2015-04-17 16:40 0 Job name flag file
[ ]jp_it8M1LY.align2015-04-17 18:10 86KPSIBLAST alignment in FASTA format
[TXT]jp_it8M1LY.als2015-04-17 18:10 4.1KAlscript command file for PS/PDF output
[ ]jp_it8M1LY.blast.gz2015-04-17 18:10 434KCompressed PSIBLAST output file
[TXT]jp_it8M1LY.coils.csv2015-04-17 18:10 1.7KCOILS output in CSV format
[ ]jp_it8M1LY.coilseq.lupas_142015-04-17 18:10 12KCOILS output, window length 14
[ ]jp_it8M1LY.coilseq.lupas_212015-04-17 18:10 12KCOILS output, window length 21
[ ]jp_it8M1LY.coilseq.lupas_282015-04-17 18:10 12KCOILS output, window length 28
[ ]jp_it8M1LY.concise2015-04-17 18:10 178KPrediction: coiled-coil, solvent, alignment
[ ]jp_it8M1LY.concise.blc2015-04-17 18:10 89KBLC format prediction and alignment data
[ ]jp_it8M1LY.concise.fasta2015-04-17 18:10 89KPrediction: coiled-coil, solvent, alignment
[ ]jp_it8M1LY.concise.pdf2015-04-17 18:11 600KPDF prediction and alignment data
[ ]jp_it8M1LY.concise.ps2015-04-17 18:10 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_it8M1LY.fasta2015-04-17 17:23 303 Input query sequence in FASTA format
[ ]jp_it8M1LY.full_MSA.fasta2015-04-17 18:10 540KFull MSA before JPred filters in FASTA
[TXT]jp_it8M1LY.full_MSA.fasta.noGaps.html2015-04-17 18:11 269KFull MSA before JPred filters in FASTA
[TXT]jp_it8M1LY.full_MSA.fasta.withGaps.html2015-04-17 18:11 2.2MFull MSA before JPred filters in FASTA
[ ]jp_it8M1LY.hmm2015-04-17 18:10 54KHHMer2 profile of the alignment
[TXT]jp_it8M1LY.html2015-04-17 18:10 164KHTML prediction and alignment data
[ ]jp_it8M1LY.input2015-04-17 16:40 294 Raw input data for analysis
[ ]jp_it8M1LY.jalview2015-04-17 18:10 6.5KJalview annotation file for alignment
[ ]jp_it8M1LY.jnet2015-04-17 18:10 10KJnet secondary structure output
[TXT]jp_it8M1LY.profile2015-04-17 18:07 46KPSIBLAST profile from alignment
[ ]jp_it8M1LY.pssm2015-04-17 18:10 62KPSIBLAST PSSM for Jnet
[TXT]jp_it8M1LY.results.html2016-02-15 12:17 122KJPred results page
[TXT]jp_it8M1LY.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_it8M1LY.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_it8M1LY.seq2015-04-17 16:40 303 Sequence data file
[TXT]jp_it8M1LY.simple.html2015-04-17 18:10 1.9KBrief HTML: sequence and prediction only
[TXT]jp_it8M1LY.svg.html2015-04-17 18:11 114KJalview SVG summary of results
[ ]jp_it8M1LY.tar.gz2015-04-17 18:11 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.