JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:32 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1ojha_.name2015-04-17 16:41 0 Job name flag file
[ ]jp_w0eXH6C.align2015-04-17 17:32 7.0KPSIBLAST alignment in FASTA format
[TXT]jp_w0eXH6C.als2015-04-17 17:32 1.4KAlscript command file for PS/PDF output
[ ]jp_w0eXH6C.blast.gz2015-04-17 17:32 11KCompressed PSIBLAST output file
[TXT]jp_w0eXH6C.coils.csv2015-04-17 17:32 342 COILS output in CSV format
[ ]jp_w0eXH6C.coilseq.lupas_142015-04-17 17:32 2.2KCOILS output, window length 14
[ ]jp_w0eXH6C.coilseq.lupas_212015-04-17 17:32 2.2KCOILS output, window length 21
[ ]jp_w0eXH6C.coilseq.lupas_282015-04-17 17:32 2.2KCOILS output, window length 28
[ ]jp_w0eXH6C.concise2015-04-17 17:32 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_w0eXH6C.concise.blc2015-04-17 17:32 7.7KBLC format prediction and alignment data
[ ]jp_w0eXH6C.concise.fasta2015-04-17 17:32 7.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_w0eXH6C.concise.pdf2015-04-17 17:32 47KPDF prediction and alignment data
[ ]jp_w0eXH6C.concise.ps2015-04-17 17:32 810KPrediction: coiled-coil, solvent, alignment
[ ]jp_w0eXH6C.fasta2015-04-17 17:23 65 Input query sequence in FASTA format
[ ]jp_w0eXH6C.full_MSA.fasta2015-04-17 17:32 11KFull MSA before JPred filters in FASTA
[TXT]jp_w0eXH6C.full_MSA.fasta.noGaps.html2015-04-17 17:32 30KFull MSA before JPred filters in FASTA
[TXT]jp_w0eXH6C.full_MSA.fasta.withGaps.html2015-04-17 17:32 34KFull MSA before JPred filters in FASTA
[ ]jp_w0eXH6C.hmm2015-04-17 17:32 9.8KHHMer2 profile of the alignment
[TXT]jp_w0eXH6C.html2015-04-17 17:32 34KHTML prediction and alignment data
[ ]jp_w0eXH6C.input2015-04-17 16:41 59 Raw input data for analysis
[ ]jp_w0eXH6C.jalview2015-04-17 17:32 1.9KJalview annotation file for alignment
[ ]jp_w0eXH6C.jnet2015-04-17 17:32 2.0KJnet secondary structure output
[TXT]jp_w0eXH6C.profile2015-04-17 17:30 8.7KPSIBLAST profile from alignment
[ ]jp_w0eXH6C.pssm2015-04-17 17:32 11KPSIBLAST PSSM for Jnet
[TXT]jp_w0eXH6C.results.html2016-02-15 12:17 31KJPred results page
[TXT]jp_w0eXH6C.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_w0eXH6C.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_w0eXH6C.seq2015-04-17 16:41 65 Sequence data file
[TXT]jp_w0eXH6C.simple.html2015-04-17 17:32 1.0KBrief HTML: sequence and prediction only
[TXT]jp_w0eXH6C.svg.html2015-04-17 17:32 23KJalview SVG summary of results
[ ]jp_w0eXH6C.tar.gz2015-04-17 17:32 92KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.