JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:33 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1olza2.name2015-04-17 18:29 0 Job name flag file
[ ]jp_iMjtGtb.align2015-04-17 20:32 318KPSIBLAST alignment in FASTA format
[TXT]jp_iMjtGtb.als2015-04-17 20:32 5.8KAlscript command file for PS/PDF output
[ ]jp_iMjtGtb.blast.gz2015-04-17 20:30 6.7MCompressed PSIBLAST output file
[TXT]jp_iMjtGtb.coils.csv2015-04-17 20:32 2.8KCOILS output in CSV format
[ ]jp_iMjtGtb.coilseq.lupas_142015-04-17 20:32 20KCOILS output, window length 14
[ ]jp_iMjtGtb.coilseq.lupas_212015-04-17 20:32 20KCOILS output, window length 21
[ ]jp_iMjtGtb.coilseq.lupas_282015-04-17 20:32 20KCOILS output, window length 28
[ ]jp_iMjtGtb.concise2015-04-17 20:32 640KPrediction: coiled-coil, solvent, alignment
[ ]jp_iMjtGtb.concise.blc2015-04-17 20:32 320KBLC format prediction and alignment data
[ ]jp_iMjtGtb.concise.fasta2015-04-17 20:32 323KPrediction: coiled-coil, solvent, alignment
[ ]jp_iMjtGtb.concise.pdf2015-04-17 20:33 2.2MPDF prediction and alignment data
[ ]jp_iMjtGtb.concise.ps2015-04-17 20:32 40MPrediction: coiled-coil, solvent, alignment
[ ]jp_iMjtGtb.fasta2015-04-17 20:23 493 Input query sequence in FASTA format
[ ]jp_iMjtGtb.full_MSA.fasta2015-04-17 20:31 15MFull MSA before JPred filters in FASTA
[TXT]jp_iMjtGtb.full_MSA.fasta.noGaps.html2015-04-17 20:33 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_iMjtGtb.full_MSA.fasta.withGaps.html2015-04-17 20:33 46MFull MSA before JPred filters in FASTA
[ ]jp_iMjtGtb.hmm2015-04-17 20:32 89KHHMer2 profile of the alignment
[TXT]jp_iMjtGtb.html2015-04-17 20:32 474KHTML prediction and alignment data
[ ]jp_iMjtGtb.input2015-04-17 18:29 481 Raw input data for analysis
[ ]jp_iMjtGtb.jalview2015-04-17 20:32 10KJalview annotation file for alignment
[ ]jp_iMjtGtb.jnet2015-04-17 20:32 17KJnet secondary structure output
[TXT]jp_iMjtGtb.profile2015-04-17 20:27 76KPSIBLAST profile from alignment
[ ]jp_iMjtGtb.pssm2015-04-17 20:32 102KPSIBLAST PSSM for Jnet
[TXT]jp_iMjtGtb.results.html2016-02-15 12:17 192KJPred results page
[TXT]jp_iMjtGtb.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_iMjtGtb.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_iMjtGtb.seq2015-04-17 18:29 493 Sequence data file
[TXT]jp_iMjtGtb.simple.html2015-04-17 20:32 2.6KBrief HTML: sequence and prediction only
[TXT]jp_iMjtGtb.svg.html2015-04-17 20:33 184KJalview SVG summary of results
[ ]jp_iMjtGtb.tar.gz2015-04-17 20:33 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.