JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:50 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1or7a2.name2015-04-17 17:17 0 Job name flag file
[ ]jp_IJKQX3C.align2015-04-17 18:49 180KPSIBLAST alignment in FASTA format
[TXT]jp_IJKQX3C.als2015-04-17 18:49 2.7KAlscript command file for PS/PDF output
[ ]jp_IJKQX3C.blast.gz2015-04-17 18:48 11MCompressed PSIBLAST output file
[TXT]jp_IJKQX3C.coils.csv2015-04-17 18:49 1.1KCOILS output in CSV format
[ ]jp_IJKQX3C.coilseq.lupas_142015-04-17 18:49 7.6KCOILS output, window length 14
[ ]jp_IJKQX3C.coilseq.lupas_212015-04-17 18:49 7.6KCOILS output, window length 21
[ ]jp_IJKQX3C.coilseq.lupas_282015-04-17 18:49 7.6KCOILS output, window length 28
[ ]jp_IJKQX3C.concise2015-04-17 18:49 353KPrediction: coiled-coil, solvent, alignment
[ ]jp_IJKQX3C.concise.blc2015-04-17 18:49 180KBLC format prediction and alignment data
[ ]jp_IJKQX3C.concise.fasta2015-04-17 18:49 182KPrediction: coiled-coil, solvent, alignment
[ ]jp_IJKQX3C.concise.pdf2015-04-17 18:50 1.2MPDF prediction and alignment data
[ ]jp_IJKQX3C.concise.ps2015-04-17 18:49 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_IJKQX3C.fasta2015-04-17 18:24 196 Input query sequence in FASTA format
[ ]jp_IJKQX3C.full_MSA.fasta2015-04-17 18:49 14MFull MSA before JPred filters in FASTA
[TXT]jp_IJKQX3C.full_MSA.fasta.noGaps.html2015-04-17 18:50 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_IJKQX3C.full_MSA.fasta.withGaps.html2015-04-17 18:50 47MFull MSA before JPred filters in FASTA
[ ]jp_IJKQX3C.hmm2015-04-17 18:49 34KHHMer2 profile of the alignment
[TXT]jp_IJKQX3C.html2015-04-17 18:49 373KHTML prediction and alignment data
[ ]jp_IJKQX3C.input2015-04-17 17:17 188 Raw input data for analysis
[ ]jp_IJKQX3C.jalview2015-04-17 18:49 4.5KJalview annotation file for alignment
[ ]jp_IJKQX3C.jnet2015-04-17 18:49 6.7KJnet secondary structure output
[TXT]jp_IJKQX3C.profile2015-04-17 18:46 29KPSIBLAST profile from alignment
[ ]jp_IJKQX3C.pssm2015-04-17 18:49 39KPSIBLAST PSSM for Jnet
[TXT]jp_IJKQX3C.results.html2016-02-15 12:18 82KJPred results page
[TXT]jp_IJKQX3C.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_IJKQX3C.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_IJKQX3C.seq2015-04-17 17:17 196 Sequence data file
[TXT]jp_IJKQX3C.simple.html2015-04-17 18:49 1.5KBrief HTML: sequence and prediction only
[TXT]jp_IJKQX3C.svg.html2015-04-17 18:50 74KJalview SVG summary of results
[ ]jp_IJKQX3C.tar.gz2015-04-17 18:50 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.