JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:38 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1owla2.name2015-04-17 19:08 0 Job name flag file
[ ]jp_I5vy5zU.align2015-04-17 21:37 195KPSIBLAST alignment in FASTA format
[TXT]jp_I5vy5zU.als2015-04-17 21:38 2.9KAlscript command file for PS/PDF output
[ ]jp_I5vy5zU.blast.gz2015-04-17 21:36 5.2MCompressed PSIBLAST output file
[TXT]jp_I5vy5zU.coils.csv2015-04-17 21:37 1.2KCOILS output in CSV format
[ ]jp_I5vy5zU.coilseq.lupas_142015-04-17 21:37 8.5KCOILS output, window length 14
[ ]jp_I5vy5zU.coilseq.lupas_212015-04-17 21:37 8.5KCOILS output, window length 21
[ ]jp_I5vy5zU.coilseq.lupas_282015-04-17 21:37 8.5KCOILS output, window length 28
[ ]jp_I5vy5zU.concise2015-04-17 21:37 384KPrediction: coiled-coil, solvent, alignment
[ ]jp_I5vy5zU.concise.blc2015-04-17 21:38 195KBLC format prediction and alignment data
[ ]jp_I5vy5zU.concise.fasta2015-04-17 21:38 197KPrediction: coiled-coil, solvent, alignment
[ ]jp_I5vy5zU.concise.pdf2015-04-17 21:38 1.4MPDF prediction and alignment data
[ ]jp_I5vy5zU.concise.ps2015-04-17 21:38 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_I5vy5zU.fasta2015-04-17 21:29 217 Input query sequence in FASTA format
[ ]jp_I5vy5zU.full_MSA.fasta2015-04-17 21:37 8.9MFull MSA before JPred filters in FASTA
[TXT]jp_I5vy5zU.full_MSA.fasta.noGaps.html2015-04-17 21:38 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_I5vy5zU.full_MSA.fasta.withGaps.html2015-04-17 21:38 26MFull MSA before JPred filters in FASTA
[ ]jp_I5vy5zU.hmm2015-04-17 21:37 38KHHMer2 profile of the alignment
[TXT]jp_I5vy5zU.html2015-04-17 21:37 385KHTML prediction and alignment data
[ ]jp_I5vy5zU.input2015-04-17 19:08 209 Raw input data for analysis
[ ]jp_I5vy5zU.jalview2015-04-17 21:38 4.8KJalview annotation file for alignment
[ ]jp_I5vy5zU.jnet2015-04-17 21:37 7.4KJnet secondary structure output
[TXT]jp_I5vy5zU.profile2015-04-17 21:33 32KPSIBLAST profile from alignment
[ ]jp_I5vy5zU.pssm2015-04-17 21:37 43KPSIBLAST PSSM for Jnet
[TXT]jp_I5vy5zU.results.html2016-02-15 12:18 88KJPred results page
[TXT]jp_I5vy5zU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_I5vy5zU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_I5vy5zU.seq2015-04-17 19:08 217 Sequence data file
[TXT]jp_I5vy5zU.simple.html2015-04-17 21:37 1.5KBrief HTML: sequence and prediction only
[TXT]jp_I5vy5zU.svg.html2015-04-17 21:38 80KJalview SVG summary of results
[ ]jp_I5vy5zU.tar.gz2015-04-17 21:38 9.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.