JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:36 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1p6oa_.name2015-04-17 18:29 0 Job name flag file
[ ]jp_FxKpMOx.align2015-04-17 20:35 155KPSIBLAST alignment in FASTA format
[TXT]jp_FxKpMOx.als2015-04-17 20:35 2.8KAlscript command file for PS/PDF output
[ ]jp_FxKpMOx.blast.gz2015-04-17 20:33 10MCompressed PSIBLAST output file
[TXT]jp_FxKpMOx.coils.csv2015-04-17 20:35 966 COILS output in CSV format
[ ]jp_FxKpMOx.coilseq.lupas_142015-04-17 20:35 6.6KCOILS output, window length 14
[ ]jp_FxKpMOx.coilseq.lupas_212015-04-17 20:35 6.6KCOILS output, window length 21
[ ]jp_FxKpMOx.coilseq.lupas_282015-04-17 20:35 6.6KCOILS output, window length 28
[ ]jp_FxKpMOx.concise2015-04-17 20:35 303KPrediction: coiled-coil, solvent, alignment
[ ]jp_FxKpMOx.concise.blc2015-04-17 20:35 155KBLC format prediction and alignment data
[ ]jp_FxKpMOx.concise.fasta2015-04-17 20:35 157KPrediction: coiled-coil, solvent, alignment
[ ]jp_FxKpMOx.concise.pdf2015-04-17 20:35 1.0MPDF prediction and alignment data
[ ]jp_FxKpMOx.concise.ps2015-04-17 20:35 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_FxKpMOx.fasta2015-04-17 20:23 171 Input query sequence in FASTA format
[ ]jp_FxKpMOx.full_MSA.fasta2015-04-17 20:34 25MFull MSA before JPred filters in FASTA
[TXT]jp_FxKpMOx.full_MSA.fasta.noGaps.html2015-04-17 20:36 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_FxKpMOx.full_MSA.fasta.withGaps.html2015-04-17 20:36 60MFull MSA before JPred filters in FASTA
[ ]jp_FxKpMOx.hmm2015-04-17 20:35 29KHHMer2 profile of the alignment
[TXT]jp_FxKpMOx.html2015-04-17 20:35 342KHTML prediction and alignment data
[ ]jp_FxKpMOx.input2015-04-17 18:29 163 Raw input data for analysis
[ ]jp_FxKpMOx.jalview2015-04-17 20:35 4.0KJalview annotation file for alignment
[ ]jp_FxKpMOx.jnet2015-04-17 20:35 5.7KJnet secondary structure output
[TXT]jp_FxKpMOx.profile2015-04-17 20:32 25KPSIBLAST profile from alignment
[ ]jp_FxKpMOx.pssm2015-04-17 20:35 34KPSIBLAST PSSM for Jnet
[TXT]jp_FxKpMOx.results.html2016-02-15 12:18 73KJPred results page
[TXT]jp_FxKpMOx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FxKpMOx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FxKpMOx.seq2015-04-17 18:29 171 Sequence data file
[TXT]jp_FxKpMOx.simple.html2015-04-17 20:35 1.4KBrief HTML: sequence and prediction only
[TXT]jp_FxKpMOx.svg.html2015-04-17 20:36 64KJalview SVG summary of results
[ ]jp_FxKpMOx.tar.gz2015-04-17 20:36 17MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.