JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:53 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qmea1.name2015-04-17 16:22 0 Job name flag file
[ ]jp_jOKQfQp.align2015-04-17 16:53 39KPSIBLAST alignment in FASTA format
[TXT]jp_jOKQfQp.als2015-04-17 16:53 2.1KAlscript command file for PS/PDF output
[ ]jp_jOKQfQp.blast.gz2015-04-17 16:53 56KCompressed PSIBLAST output file
[TXT]jp_jOKQfQp.coils.csv2015-04-17 16:53 396 COILS output in CSV format
[ ]jp_jOKQfQp.coilseq.lupas_142015-04-17 16:53 2.6KCOILS output, window length 14
[ ]jp_jOKQfQp.coilseq.lupas_212015-04-17 16:53 2.6KCOILS output, window length 21
[ ]jp_jOKQfQp.coilseq.lupas_282015-04-17 16:53 2.6KCOILS output, window length 28
[ ]jp_jOKQfQp.concise2015-04-17 16:53 75KPrediction: coiled-coil, solvent, alignment
[ ]jp_jOKQfQp.concise.blc2015-04-17 16:53 40KBLC format prediction and alignment data
[ ]jp_jOKQfQp.concise.fasta2015-04-17 16:53 40KPrediction: coiled-coil, solvent, alignment
[ ]jp_jOKQfQp.concise.pdf2015-04-17 16:53 234KPDF prediction and alignment data
[ ]jp_jOKQfQp.concise.ps2015-04-17 16:53 4.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_jOKQfQp.fasta2015-04-17 16:51 74 Input query sequence in FASTA format
[ ]jp_jOKQfQp.full_MSA.fasta2015-04-17 16:53 112KFull MSA before JPred filters in FASTA
[TXT]jp_jOKQfQp.full_MSA.fasta.noGaps.html2015-04-17 16:53 112KFull MSA before JPred filters in FASTA
[TXT]jp_jOKQfQp.full_MSA.fasta.withGaps.html2015-04-17 16:53 532KFull MSA before JPred filters in FASTA
[ ]jp_jOKQfQp.hmm2015-04-17 16:53 11KHHMer2 profile of the alignment
[TXT]jp_jOKQfQp.html2015-04-17 16:53 142KHTML prediction and alignment data
[ ]jp_jOKQfQp.input2015-04-17 16:22 68 Raw input data for analysis
[ ]jp_jOKQfQp.jalview2015-04-17 16:53 2.0KJalview annotation file for alignment
[ ]jp_jOKQfQp.jnet2015-04-17 16:53 2.3KJnet secondary structure output
[TXT]jp_jOKQfQp.profile2015-04-17 16:53 10KPSIBLAST profile from alignment
[ ]jp_jOKQfQp.pssm2015-04-17 16:53 13KPSIBLAST PSSM for Jnet
[TXT]jp_jOKQfQp.results.html2016-02-15 12:18 36KJPred results page
[TXT]jp_jOKQfQp.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_jOKQfQp.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_jOKQfQp.seq2015-04-17 16:22 74 Sequence data file
[TXT]jp_jOKQfQp.simple.html2015-04-17 16:53 1.1KBrief HTML: sequence and prediction only
[TXT]jp_jOKQfQp.svg.html2015-04-17 16:53 28KJalview SVG summary of results
[ ]jp_jOKQfQp.tar.gz2015-04-17 16:53 442KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.