JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:24 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ri6a_.name2015-04-17 17:20 0 Job name flag file
[ ]jp_rfa7VHr.align2015-04-17 19:21 278KPSIBLAST alignment in FASTA format
[TXT]jp_rfa7VHr.als2015-04-17 19:21 5.4KAlscript command file for PS/PDF output
[ ]jp_rfa7VHr.blast.gz2015-04-17 19:14 38MCompressed PSIBLAST output file
[TXT]jp_rfa7VHr.coils.csv2015-04-17 19:21 2.0KCOILS output in CSV format
[ ]jp_rfa7VHr.coilseq.lupas_142015-04-17 19:21 14KCOILS output, window length 14
[ ]jp_rfa7VHr.coilseq.lupas_212015-04-17 19:21 14KCOILS output, window length 21
[ ]jp_rfa7VHr.coilseq.lupas_282015-04-17 19:21 14KCOILS output, window length 28
[ ]jp_rfa7VHr.concise2015-04-17 19:21 555KPrediction: coiled-coil, solvent, alignment
[ ]jp_rfa7VHr.concise.blc2015-04-17 19:21 279KBLC format prediction and alignment data
[ ]jp_rfa7VHr.concise.fasta2015-04-17 19:21 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_rfa7VHr.concise.pdf2015-04-17 19:21 2.0MPDF prediction and alignment data
[ ]jp_rfa7VHr.concise.ps2015-04-17 19:21 35MPrediction: coiled-coil, solvent, alignment
[ ]jp_rfa7VHr.fasta2015-04-17 18:26 350 Input query sequence in FASTA format
[ ]jp_rfa7VHr.full_MSA.fasta2015-04-17 19:19 71MFull MSA before JPred filters in FASTA
[TXT]jp_rfa7VHr.full_MSA.fasta.noGaps.html2015-04-17 19:24 5.1MFull MSA before JPred filters in FASTA
[TXT]jp_rfa7VHr.full_MSA.fasta.withGaps.html2015-04-17 19:24 160MFull MSA before JPred filters in FASTA
[ ]jp_rfa7VHr.hmm2015-04-17 19:21 62KHHMer2 profile of the alignment
[TXT]jp_rfa7VHr.html2015-04-17 19:21 458KHTML prediction and alignment data
[ ]jp_rfa7VHr.input2015-04-17 17:20 340 Raw input data for analysis
[ ]jp_rfa7VHr.jalview2015-04-17 19:21 7.4KJalview annotation file for alignment
[ ]jp_rfa7VHr.jnet2015-04-17 19:21 12KJnet secondary structure output
[TXT]jp_rfa7VHr.profile2015-04-17 18:56 53KPSIBLAST profile from alignment
[ ]jp_rfa7VHr.pssm2015-04-17 19:21 72KPSIBLAST PSSM for Jnet
[TXT]jp_rfa7VHr.results.html2016-02-15 12:18 140KJPred results page
[TXT]jp_rfa7VHr.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_rfa7VHr.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_rfa7VHr.seq2015-04-17 17:20 350 Sequence data file
[TXT]jp_rfa7VHr.simple.html2015-04-17 19:21 2.2KBrief HTML: sequence and prediction only
[TXT]jp_rfa7VHr.svg.html2015-04-17 19:24 132KJalview SVG summary of results
[ ]jp_rfa7VHr.tar.gz2015-04-17 19:24 55MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.