JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:45 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rlra1.name2015-04-17 16:06 0 Job name flag file
[ ]jp_EJGaU87.align2015-04-17 16:45 179KPSIBLAST alignment in FASTA format
[TXT]jp_EJGaU87.als2015-04-17 16:45 3.0KAlscript command file for PS/PDF output
[ ]jp_EJGaU87.blast.gz2015-04-17 16:44 2.2MCompressed PSIBLAST output file
[TXT]jp_EJGaU87.coils.csv2015-04-17 16:45 1.3KCOILS output in CSV format
[ ]jp_EJGaU87.coilseq.lupas_142015-04-17 16:45 8.9KCOILS output, window length 14
[ ]jp_EJGaU87.coilseq.lupas_212015-04-17 16:45 8.9KCOILS output, window length 21
[ ]jp_EJGaU87.coilseq.lupas_282015-04-17 16:45 8.9KCOILS output, window length 28
[ ]jp_EJGaU87.concise2015-04-17 16:45 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_EJGaU87.concise.blc2015-04-17 16:45 180KBLC format prediction and alignment data
[ ]jp_EJGaU87.concise.fasta2015-04-17 16:45 181KPrediction: coiled-coil, solvent, alignment
[ ]jp_EJGaU87.concise.pdf2015-04-17 16:45 1.2MPDF prediction and alignment data
[ ]jp_EJGaU87.concise.ps2015-04-17 16:45 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_EJGaU87.fasta2015-04-17 16:30 227 Input query sequence in FASTA format
[ ]jp_EJGaU87.full_MSA.fasta2015-04-17 16:44 5.6MFull MSA before JPred filters in FASTA
[TXT]jp_EJGaU87.full_MSA.fasta.noGaps.html2015-04-17 16:45 973KFull MSA before JPred filters in FASTA
[TXT]jp_EJGaU87.full_MSA.fasta.withGaps.html2015-04-17 16:45 18MFull MSA before JPred filters in FASTA
[ ]jp_EJGaU87.hmm2015-04-17 16:45 40KHHMer2 profile of the alignment
[TXT]jp_EJGaU87.html2015-04-17 16:45 351KHTML prediction and alignment data
[ ]jp_EJGaU87.input2015-04-17 16:06 219 Raw input data for analysis
[ ]jp_EJGaU87.jalview2015-04-17 16:45 5.1KJalview annotation file for alignment
[ ]jp_EJGaU87.jnet2015-04-17 16:45 7.8KJnet secondary structure output
[TXT]jp_EJGaU87.profile2015-04-17 16:40 34KPSIBLAST profile from alignment
[ ]jp_EJGaU87.pssm2015-04-17 16:45 46KPSIBLAST PSSM for Jnet
[TXT]jp_EJGaU87.results.html2016-02-15 12:18 94KJPred results page
[TXT]jp_EJGaU87.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_EJGaU87.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_EJGaU87.seq2015-04-17 16:06 227 Sequence data file
[TXT]jp_EJGaU87.simple.html2015-04-17 16:45 1.6KBrief HTML: sequence and prediction only
[TXT]jp_EJGaU87.svg.html2015-04-17 16:45 86KJalview SVG summary of results
[ ]jp_EJGaU87.tar.gz2015-04-17 16:46 5.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.