JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:27 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1roca_.name2015-04-17 18:31 0 Job name flag file
[ ]jp_1hKF1KW.align2015-04-17 20:27 29KPSIBLAST alignment in FASTA format
[TXT]jp_1hKF1KW.als2015-04-17 20:27 2.7KAlscript command file for PS/PDF output
[ ]jp_1hKF1KW.blast.gz2015-04-17 20:27 209KCompressed PSIBLAST output file
[TXT]jp_1hKF1KW.coils.csv2015-04-17 20:27 960 COILS output in CSV format
[ ]jp_1hKF1KW.coilseq.lupas_142015-04-17 20:27 6.5KCOILS output, window length 14
[ ]jp_1hKF1KW.coilseq.lupas_212015-04-17 20:27 6.5KCOILS output, window length 21
[ ]jp_1hKF1KW.coilseq.lupas_282015-04-17 20:27 6.5KCOILS output, window length 28
[ ]jp_1hKF1KW.concise2015-04-17 20:27 62KPrediction: coiled-coil, solvent, alignment
[ ]jp_1hKF1KW.concise.blc2015-04-17 20:27 31KBLC format prediction and alignment data
[ ]jp_1hKF1KW.concise.fasta2015-04-17 20:27 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_1hKF1KW.concise.pdf2015-04-17 20:27 204KPDF prediction and alignment data
[ ]jp_1hKF1KW.concise.ps2015-04-17 20:27 3.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_1hKF1KW.fasta2015-04-17 20:24 170 Input query sequence in FASTA format
[ ]jp_1hKF1KW.full_MSA.fasta2015-04-17 20:27 337KFull MSA before JPred filters in FASTA
[TXT]jp_1hKF1KW.full_MSA.fasta.noGaps.html2015-04-17 20:27 141KFull MSA before JPred filters in FASTA
[TXT]jp_1hKF1KW.full_MSA.fasta.withGaps.html2015-04-17 20:27 1.2MFull MSA before JPred filters in FASTA
[ ]jp_1hKF1KW.hmm2015-04-17 20:27 29KHHMer2 profile of the alignment
[TXT]jp_1hKF1KW.html2015-04-17 20:27 75KHTML prediction and alignment data
[ ]jp_1hKF1KW.input2015-04-17 18:31 162 Raw input data for analysis
[ ]jp_1hKF1KW.jalview2015-04-17 20:27 3.9KJalview annotation file for alignment
[ ]jp_1hKF1KW.jnet2015-04-17 20:27 5.7KJnet secondary structure output
[TXT]jp_1hKF1KW.profile2015-04-17 20:26 25KPSIBLAST profile from alignment
[ ]jp_1hKF1KW.pssm2015-04-17 20:27 33KPSIBLAST PSSM for Jnet
[TXT]jp_1hKF1KW.results.html2016-02-15 12:18 69KJPred results page
[TXT]jp_1hKF1KW.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_1hKF1KW.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_1hKF1KW.seq2015-04-17 18:31 170 Sequence data file
[TXT]jp_1hKF1KW.simple.html2015-04-17 20:27 1.4KBrief HTML: sequence and prediction only
[TXT]jp_1hKF1KW.svg.html2015-04-17 20:27 61KJalview SVG summary of results
[ ]jp_1hKF1KW.tar.gz2015-04-17 20:27 578KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.