JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:14 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rwia_.name2015-04-17 17:56 0 Job name flag file
[ ]jp_JTK1BMH.align2015-04-17 21:08 240KPSIBLAST alignment in FASTA format
[TXT]jp_JTK1BMH.als2015-04-17 21:08 5.1KAlscript command file for PS/PDF output
[ ]jp_JTK1BMH.blast.gz2015-04-17 20:57 73MCompressed PSIBLAST output file
[TXT]jp_JTK1BMH.coils.csv2015-04-17 21:08 1.5KCOILS output in CSV format
[ ]jp_JTK1BMH.coilseq.lupas_142015-04-17 21:08 11KCOILS output, window length 14
[ ]jp_JTK1BMH.coilseq.lupas_212015-04-17 21:08 11KCOILS output, window length 21
[ ]jp_JTK1BMH.coilseq.lupas_282015-04-17 21:08 11KCOILS output, window length 28
[ ]jp_JTK1BMH.concise2015-04-17 21:08 475KPrediction: coiled-coil, solvent, alignment
[ ]jp_JTK1BMH.concise.blc2015-04-17 21:08 240KBLC format prediction and alignment data
[ ]jp_JTK1BMH.concise.fasta2015-04-17 21:08 242KPrediction: coiled-coil, solvent, alignment
[ ]jp_JTK1BMH.concise.pdf2015-04-17 21:09 1.7MPDF prediction and alignment data
[ ]jp_JTK1BMH.concise.ps2015-04-17 21:08 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_JTK1BMH.fasta2015-04-17 19:28 272 Input query sequence in FASTA format
[ ]jp_JTK1BMH.full_MSA.fasta2015-04-17 21:05 141MFull MSA before JPred filters in FASTA
[TXT]jp_JTK1BMH.full_MSA.fasta.noGaps.html2015-04-17 21:14 9.1MFull MSA before JPred filters in FASTA
[TXT]jp_JTK1BMH.full_MSA.fasta.withGaps.html2015-04-17 21:14 289MFull MSA before JPred filters in FASTA
[ ]jp_JTK1BMH.hmm2015-04-17 21:08 48KHHMer2 profile of the alignment
[TXT]jp_JTK1BMH.html2015-04-17 21:08 431KHTML prediction and alignment data
[ ]jp_JTK1BMH.input2015-04-17 17:56 263 Raw input data for analysis
[ ]jp_JTK1BMH.jalview2015-04-17 21:08 5.9KJalview annotation file for alignment
[ ]jp_JTK1BMH.jnet2015-04-17 21:08 9.4KJnet secondary structure output
[TXT]jp_JTK1BMH.profile2015-04-17 20:23 41KPSIBLAST profile from alignment
[ ]jp_JTK1BMH.pssm2015-04-17 21:08 55KPSIBLAST PSSM for Jnet
[TXT]jp_JTK1BMH.results.html2016-02-15 12:18 112KJPred results page
[TXT]jp_JTK1BMH.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_JTK1BMH.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_JTK1BMH.seq2015-04-17 17:56 272 Sequence data file
[TXT]jp_JTK1BMH.simple.html2015-04-17 21:08 2.0KBrief HTML: sequence and prediction only
[TXT]jp_JTK1BMH.svg.html2015-04-17 21:14 104KJalview SVG summary of results
[ ]jp_JTK1BMH.tar.gz2015-04-17 21:14 100MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.