JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:35 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1t11a1.name2015-04-17 18:32 0 Job name flag file
[ ]jp_JcLFqyI.align2015-04-17 20:34 173KPSIBLAST alignment in FASTA format
[TXT]jp_JcLFqyI.als2015-04-17 20:35 2.0KAlscript command file for PS/PDF output
[ ]jp_JcLFqyI.blast.gz2015-04-17 20:33 1.2MCompressed PSIBLAST output file
[TXT]jp_JcLFqyI.coils.csv2015-04-17 20:35 804 COILS output in CSV format
[ ]jp_JcLFqyI.coilseq.lupas_142015-04-17 20:35 5.4KCOILS output, window length 14
[ ]jp_JcLFqyI.coilseq.lupas_212015-04-17 20:35 5.4KCOILS output, window length 21
[ ]jp_JcLFqyI.coilseq.lupas_282015-04-17 20:35 5.4KCOILS output, window length 28
[ ]jp_JcLFqyI.concise2015-04-17 20:35 336KPrediction: coiled-coil, solvent, alignment
[ ]jp_JcLFqyI.concise.blc2015-04-17 20:35 173KBLC format prediction and alignment data
[ ]jp_JcLFqyI.concise.fasta2015-04-17 20:35 174KPrediction: coiled-coil, solvent, alignment
[ ]jp_JcLFqyI.concise.pdf2015-04-17 20:35 1.1MPDF prediction and alignment data
[ ]jp_JcLFqyI.concise.ps2015-04-17 20:35 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_JcLFqyI.fasta2015-04-17 20:27 143 Input query sequence in FASTA format
[ ]jp_JcLFqyI.full_MSA.fasta2015-04-17 20:34 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_JcLFqyI.full_MSA.fasta.noGaps.html2015-04-17 20:35 771KFull MSA before JPred filters in FASTA
[TXT]jp_JcLFqyI.full_MSA.fasta.withGaps.html2015-04-17 20:35 9.1MFull MSA before JPred filters in FASTA
[ ]jp_JcLFqyI.hmm2015-04-17 20:35 24KHHMer2 profile of the alignment
[TXT]jp_JcLFqyI.html2015-04-17 20:35 415KHTML prediction and alignment data
[ ]jp_JcLFqyI.input2015-04-17 18:32 136 Raw input data for analysis
[ ]jp_JcLFqyI.jalview2015-04-17 20:35 3.5KJalview annotation file for alignment
[ ]jp_JcLFqyI.jnet2015-04-17 20:35 4.8KJnet secondary structure output
[TXT]jp_JcLFqyI.profile2015-04-17 20:31 21KPSIBLAST profile from alignment
[ ]jp_JcLFqyI.pssm2015-04-17 20:34 28KPSIBLAST PSSM for Jnet
[TXT]jp_JcLFqyI.results.html2016-02-15 12:18 59KJPred results page
[TXT]jp_JcLFqyI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_JcLFqyI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_JcLFqyI.seq2015-04-17 18:32 143 Sequence data file
[TXT]jp_JcLFqyI.simple.html2015-04-17 20:35 1.2KBrief HTML: sequence and prediction only
[TXT]jp_JcLFqyI.svg.html2015-04-17 20:35 51KJalview SVG summary of results
[ ]jp_JcLFqyI.tar.gz2015-04-17 20:35 3.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.