JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:23 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1t2da2.name2015-04-17 19:11 0 Job name flag file
[ ]jp_eGnJ9BT.align2015-04-17 22:22 168KPSIBLAST alignment in FASTA format
[TXT]jp_eGnJ9BT.als2015-04-17 22:22 2.6KAlscript command file for PS/PDF output
[ ]jp_eGnJ9BT.blast.gz2015-04-17 22:21 3.2MCompressed PSIBLAST output file
[TXT]jp_eGnJ9BT.coils.csv2015-04-17 22:22 1.0KCOILS output in CSV format
[ ]jp_eGnJ9BT.coilseq.lupas_142015-04-17 22:22 6.9KCOILS output, window length 14
[ ]jp_eGnJ9BT.coilseq.lupas_212015-04-17 22:22 6.9KCOILS output, window length 21
[ ]jp_eGnJ9BT.coilseq.lupas_282015-04-17 22:22 6.9KCOILS output, window length 28
[ ]jp_eGnJ9BT.concise2015-04-17 22:22 330KPrediction: coiled-coil, solvent, alignment
[ ]jp_eGnJ9BT.concise.blc2015-04-17 22:22 168KBLC format prediction and alignment data
[ ]jp_eGnJ9BT.concise.fasta2015-04-17 22:22 170KPrediction: coiled-coil, solvent, alignment
[ ]jp_eGnJ9BT.concise.pdf2015-04-17 22:23 1.2MPDF prediction and alignment data
[ ]jp_eGnJ9BT.concise.ps2015-04-17 22:22 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_eGnJ9BT.fasta2015-04-17 21:34 180 Input query sequence in FASTA format
[ ]jp_eGnJ9BT.full_MSA.fasta2015-04-17 22:21 5.9MFull MSA before JPred filters in FASTA
[TXT]jp_eGnJ9BT.full_MSA.fasta.noGaps.html2015-04-17 22:23 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_eGnJ9BT.full_MSA.fasta.withGaps.html2015-04-17 22:23 24MFull MSA before JPred filters in FASTA
[ ]jp_eGnJ9BT.hmm2015-04-17 22:22 31KHHMer2 profile of the alignment
[TXT]jp_eGnJ9BT.html2015-04-17 22:22 363KHTML prediction and alignment data
[ ]jp_eGnJ9BT.input2015-04-17 19:11 172 Raw input data for analysis
[ ]jp_eGnJ9BT.jalview2015-04-17 22:22 4.2KJalview annotation file for alignment
[ ]jp_eGnJ9BT.jnet2015-04-17 22:22 6.1KJnet secondary structure output
[TXT]jp_eGnJ9BT.profile2015-04-17 22:00 27KPSIBLAST profile from alignment
[ ]jp_eGnJ9BT.pssm2015-04-17 22:22 35KPSIBLAST PSSM for Jnet
[TXT]jp_eGnJ9BT.results.html2016-02-15 12:18 75KJPred results page
[TXT]jp_eGnJ9BT.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_eGnJ9BT.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_eGnJ9BT.seq2015-04-17 19:11 180 Sequence data file
[TXT]jp_eGnJ9BT.simple.html2015-04-17 22:22 1.4KBrief HTML: sequence and prediction only
[TXT]jp_eGnJ9BT.svg.html2015-04-17 22:23 67KJalview SVG summary of results
[ ]jp_eGnJ9BT.tar.gz2015-04-17 22:23 7.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.