JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:22 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tbfa_.name2015-04-17 16:35 0 Job name flag file
[ ]jp_nQhMkaZ.align2015-04-17 17:21 177KPSIBLAST alignment in FASTA format
[TXT]jp_nQhMkaZ.als2015-04-17 17:22 3.7KAlscript command file for PS/PDF output
[ ]jp_nQhMkaZ.blast.gz2015-04-17 17:20 9.2MCompressed PSIBLAST output file
[TXT]jp_nQhMkaZ.coils.csv2015-04-17 17:22 1.9KCOILS output in CSV format
[ ]jp_nQhMkaZ.coilseq.lupas_142015-04-17 17:22 14KCOILS output, window length 14
[ ]jp_nQhMkaZ.coilseq.lupas_212015-04-17 17:22 14KCOILS output, window length 21
[ ]jp_nQhMkaZ.coilseq.lupas_282015-04-17 17:22 14KCOILS output, window length 28
[ ]jp_nQhMkaZ.concise2015-04-17 17:22 359KPrediction: coiled-coil, solvent, alignment
[ ]jp_nQhMkaZ.concise.blc2015-04-17 17:22 180KBLC format prediction and alignment data
[ ]jp_nQhMkaZ.concise.fasta2015-04-17 17:22 181KPrediction: coiled-coil, solvent, alignment
[ ]jp_nQhMkaZ.concise.pdf2015-04-17 17:22 1.3MPDF prediction and alignment data
[ ]jp_nQhMkaZ.concise.ps2015-04-17 17:22 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_nQhMkaZ.fasta2015-04-17 17:15 343 Input query sequence in FASTA format
[ ]jp_nQhMkaZ.full_MSA.fasta2015-04-17 17:21 16MFull MSA before JPred filters in FASTA
[TXT]jp_nQhMkaZ.full_MSA.fasta.noGaps.html2015-04-17 17:22 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_nQhMkaZ.full_MSA.fasta.withGaps.html2015-04-17 17:22 37MFull MSA before JPred filters in FASTA
[ ]jp_nQhMkaZ.hmm2015-04-17 17:22 61KHHMer2 profile of the alignment
[TXT]jp_nQhMkaZ.html2015-04-17 17:22 309KHTML prediction and alignment data
[ ]jp_nQhMkaZ.input2015-04-17 16:35 333 Raw input data for analysis
[ ]jp_nQhMkaZ.jalview2015-04-17 17:22 7.4KJalview annotation file for alignment
[ ]jp_nQhMkaZ.jnet2015-04-17 17:22 12KJnet secondary structure output
[TXT]jp_nQhMkaZ.profile2015-04-17 17:18 52KPSIBLAST profile from alignment
[ ]jp_nQhMkaZ.pssm2015-04-17 17:21 70KPSIBLAST PSSM for Jnet
[TXT]jp_nQhMkaZ.results.html2016-02-15 12:18 138KJPred results page
[TXT]jp_nQhMkaZ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_nQhMkaZ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_nQhMkaZ.seq2015-04-17 16:35 343 Sequence data file
[TXT]jp_nQhMkaZ.simple.html2015-04-17 17:22 1.9KBrief HTML: sequence and prediction only
[TXT]jp_nQhMkaZ.svg.html2015-04-17 17:22 130KJalview SVG summary of results
[ ]jp_nQhMkaZ.tar.gz2015-04-17 17:22 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.