JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:11 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tjla1.name2015-04-17 16:41 0 Job name flag file
[ ]jp_0WdHITY.align2015-04-17 18:10 77KPSIBLAST alignment in FASTA format
[TXT]jp_0WdHITY.als2015-04-17 18:10 1.5KAlscript command file for PS/PDF output
[ ]jp_0WdHITY.blast.gz2015-04-17 18:10 260KCompressed PSIBLAST output file
[TXT]jp_0WdHITY.coils.csv2015-04-17 18:10 654 COILS output in CSV format
[ ]jp_0WdHITY.coilseq.lupas_142015-04-17 18:10 4.4KCOILS output, window length 14
[ ]jp_0WdHITY.coilseq.lupas_212015-04-17 18:10 4.4KCOILS output, window length 21
[ ]jp_0WdHITY.coilseq.lupas_282015-04-17 18:10 4.4KCOILS output, window length 28
[ ]jp_0WdHITY.concise2015-04-17 18:10 151KPrediction: coiled-coil, solvent, alignment
[ ]jp_0WdHITY.concise.blc2015-04-17 18:10 78KBLC format prediction and alignment data
[ ]jp_0WdHITY.concise.fasta2015-04-17 18:10 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_0WdHITY.concise.pdf2015-04-17 18:10 437KPDF prediction and alignment data
[ ]jp_0WdHITY.concise.ps2015-04-17 18:10 8.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_0WdHITY.fasta2015-04-17 17:23 118 Input query sequence in FASTA format
[ ]jp_0WdHITY.full_MSA.fasta2015-04-17 18:10 384KFull MSA before JPred filters in FASTA
[TXT]jp_0WdHITY.full_MSA.fasta.noGaps.html2015-04-17 18:10 260KFull MSA before JPred filters in FASTA
[TXT]jp_0WdHITY.full_MSA.fasta.withGaps.html2015-04-17 18:10 1.6MFull MSA before JPred filters in FASTA
[ ]jp_0WdHITY.hmm2015-04-17 18:10 20KHHMer2 profile of the alignment
[TXT]jp_0WdHITY.html2015-04-17 18:10 211KHTML prediction and alignment data
[ ]jp_0WdHITY.input2015-04-17 16:41 111 Raw input data for analysis
[ ]jp_0WdHITY.jalview2015-04-17 18:10 2.9KJalview annotation file for alignment
[ ]jp_0WdHITY.jnet2015-04-17 18:10 3.9KJnet secondary structure output
[TXT]jp_0WdHITY.profile2015-04-17 18:06 17KPSIBLAST profile from alignment
[ ]jp_0WdHITY.pssm2015-04-17 18:10 22KPSIBLAST PSSM for Jnet
[TXT]jp_0WdHITY.results.html2016-02-15 12:18 48KJPred results page
[TXT]jp_0WdHITY.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_0WdHITY.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_0WdHITY.seq2015-04-17 16:41 118 Sequence data file
[TXT]jp_0WdHITY.simple.html2015-04-17 18:10 1.1KBrief HTML: sequence and prediction only
[TXT]jp_0WdHITY.svg.html2015-04-17 18:11 40KJalview SVG summary of results
[ ]jp_0WdHITY.tar.gz2015-04-17 18:11 957KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.