JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:52 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1v9ma_.name2015-04-17 16:53 0 Job name flag file
[ ]jp_KPqpBuQ.align2015-04-17 17:51 304KPSIBLAST alignment in FASTA format
[TXT]jp_KPqpBuQ.als2015-04-17 17:51 3.5KAlscript command file for PS/PDF output
[ ]jp_KPqpBuQ.blast.gz2015-04-17 17:50 1.3MCompressed PSIBLAST output file
[TXT]jp_KPqpBuQ.coils.csv2015-04-17 17:51 1.9KCOILS output in CSV format
[ ]jp_KPqpBuQ.coilseq.lupas_142015-04-17 17:51 13KCOILS output, window length 14
[ ]jp_KPqpBuQ.coilseq.lupas_212015-04-17 17:51 13KCOILS output, window length 21
[ ]jp_KPqpBuQ.coilseq.lupas_282015-04-17 17:51 13KCOILS output, window length 28
[ ]jp_KPqpBuQ.concise2015-04-17 17:51 605KPrediction: coiled-coil, solvent, alignment
[ ]jp_KPqpBuQ.concise.blc2015-04-17 17:51 304KBLC format prediction and alignment data
[ ]jp_KPqpBuQ.concise.fasta2015-04-17 17:51 308KPrediction: coiled-coil, solvent, alignment
[ ]jp_KPqpBuQ.concise.pdf2015-04-17 17:52 2.2MPDF prediction and alignment data
[ ]jp_KPqpBuQ.concise.ps2015-04-17 17:51 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_KPqpBuQ.fasta2015-04-17 17:47 329 Input query sequence in FASTA format
[ ]jp_KPqpBuQ.full_MSA.fasta2015-04-17 17:50 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_KPqpBuQ.full_MSA.fasta.noGaps.html2015-04-17 17:52 531KFull MSA before JPred filters in FASTA
[TXT]jp_KPqpBuQ.full_MSA.fasta.withGaps.html2015-04-17 17:52 11MFull MSA before JPred filters in FASTA
[ ]jp_KPqpBuQ.hmm2015-04-17 17:51 59KHHMer2 profile of the alignment
[TXT]jp_KPqpBuQ.html2015-04-17 17:51 515KHTML prediction and alignment data
[ ]jp_KPqpBuQ.input2015-04-17 16:53 319 Raw input data for analysis
[ ]jp_KPqpBuQ.jalview2015-04-17 17:51 7.2KJalview annotation file for alignment
[ ]jp_KPqpBuQ.jnet2015-04-17 17:51 11KJnet secondary structure output
[TXT]jp_KPqpBuQ.profile2015-04-17 17:49 50KPSIBLAST profile from alignment
[ ]jp_KPqpBuQ.pssm2015-04-17 17:51 67KPSIBLAST PSSM for Jnet
[TXT]jp_KPqpBuQ.results.html2016-02-15 12:18 132KJPred results page
[TXT]jp_KPqpBuQ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_KPqpBuQ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_KPqpBuQ.seq2015-04-17 16:53 329 Sequence data file
[TXT]jp_KPqpBuQ.simple.html2015-04-17 17:51 1.9KBrief HTML: sequence and prediction only
[TXT]jp_KPqpBuQ.svg.html2015-04-17 17:52 124KJalview SVG summary of results
[ ]jp_KPqpBuQ.tar.gz2015-04-17 17:52 5.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.