JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vbwa_.name2015-04-17 15:31 0 Job name flag file
[ ]jp_Nmo0b0z.align2015-04-17 15:39 30KPSIBLAST alignment in FASTA format
[TXT]jp_Nmo0b0z.als2015-04-17 15:39 1.8KAlscript command file for PS/PDF output
[ ]jp_Nmo0b0z.blast.gz2015-04-17 15:39 111KCompressed PSIBLAST output file
[TXT]jp_Nmo0b0z.coils.csv2015-04-17 15:39 438 COILS output in CSV format
[ ]jp_Nmo0b0z.coilseq.lupas_142015-04-17 15:39 2.9KCOILS output, window length 14
[ ]jp_Nmo0b0z.coilseq.lupas_212015-04-17 15:39 2.9KCOILS output, window length 21
[ ]jp_Nmo0b0z.coilseq.lupas_282015-04-17 15:39 2.9KCOILS output, window length 28
[ ]jp_Nmo0b0z.concise2015-04-17 15:39 59KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nmo0b0z.concise.blc2015-04-17 15:39 31KBLC format prediction and alignment data
[ ]jp_Nmo0b0z.concise.fasta2015-04-17 15:39 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nmo0b0z.concise.pdf2015-04-17 15:39 190KPDF prediction and alignment data
[ ]jp_Nmo0b0z.concise.ps2015-04-17 15:39 3.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_Nmo0b0z.fasta2015-04-17 15:35 81 Input query sequence in FASTA format
[ ]jp_Nmo0b0z.full_MSA.fasta2015-04-17 15:39 143KFull MSA before JPred filters in FASTA
[TXT]jp_Nmo0b0z.full_MSA.fasta.noGaps.html2015-04-17 15:39 107KFull MSA before JPred filters in FASTA
[TXT]jp_Nmo0b0z.full_MSA.fasta.withGaps.html2015-04-17 15:39 713KFull MSA before JPred filters in FASTA
[ ]jp_Nmo0b0z.hmm2015-04-17 15:39 13KHHMer2 profile of the alignment
[TXT]jp_Nmo0b0z.html2015-04-17 15:39 106KHTML prediction and alignment data
[ ]jp_Nmo0b0z.input2015-04-17 15:31 75 Raw input data for analysis
[ ]jp_Nmo0b0z.jalview2015-04-17 15:39 2.1KJalview annotation file for alignment
[ ]jp_Nmo0b0z.jnet2015-04-17 15:39 2.6KJnet secondary structure output
[TXT]jp_Nmo0b0z.profile2015-04-17 15:38 11KPSIBLAST profile from alignment
[ ]jp_Nmo0b0z.pssm2015-04-17 15:39 15KPSIBLAST PSSM for Jnet
[TXT]jp_Nmo0b0z.results.html2016-02-15 12:18 37KJPred results page
[TXT]jp_Nmo0b0z.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Nmo0b0z.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Nmo0b0z.seq2015-04-17 15:31 81 Sequence data file
[TXT]jp_Nmo0b0z.simple.html2015-04-17 15:39 1.1KBrief HTML: sequence and prediction only
[TXT]jp_Nmo0b0z.svg.html2015-04-17 15:39 29KJalview SVG summary of results
[ ]jp_Nmo0b0z.tar.gz2015-04-17 15:39 443KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.