JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:42 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vh4a_.name2015-04-17 18:35 0 Job name flag file
[ ]jp_WcHbkH2.align2015-04-17 20:41 367KPSIBLAST alignment in FASTA format
[TXT]jp_WcHbkH2.als2015-04-17 20:41 5.9KAlscript command file for PS/PDF output
[ ]jp_WcHbkH2.blast.gz2015-04-17 20:39 8.0MCompressed PSIBLAST output file
[TXT]jp_WcHbkH2.coils.csv2015-04-17 20:41 2.4KCOILS output in CSV format
[ ]jp_WcHbkH2.coilseq.lupas_142015-04-17 20:41 17KCOILS output, window length 14
[ ]jp_WcHbkH2.coilseq.lupas_212015-04-17 20:41 17KCOILS output, window length 21
[ ]jp_WcHbkH2.coilseq.lupas_282015-04-17 20:41 17KCOILS output, window length 28
[ ]jp_WcHbkH2.concise2015-04-17 20:41 732KPrediction: coiled-coil, solvent, alignment
[ ]jp_WcHbkH2.concise.blc2015-04-17 20:41 368KBLC format prediction and alignment data
[ ]jp_WcHbkH2.concise.fasta2015-04-17 20:41 371KPrediction: coiled-coil, solvent, alignment
[ ]jp_WcHbkH2.concise.pdf2015-04-17 20:41 2.5MPDF prediction and alignment data
[ ]jp_WcHbkH2.concise.ps2015-04-17 20:41 46MPrediction: coiled-coil, solvent, alignment
[ ]jp_WcHbkH2.fasta2015-04-17 20:33 428 Input query sequence in FASTA format
[ ]jp_WcHbkH2.full_MSA.fasta2015-04-17 20:40 15MFull MSA before JPred filters in FASTA
[TXT]jp_WcHbkH2.full_MSA.fasta.noGaps.html2015-04-17 20:42 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_WcHbkH2.full_MSA.fasta.withGaps.html2015-04-17 20:42 48MFull MSA before JPred filters in FASTA
[ ]jp_WcHbkH2.hmm2015-04-17 20:41 77KHHMer2 profile of the alignment
[TXT]jp_WcHbkH2.html2015-04-17 20:41 568KHTML prediction and alignment data
[ ]jp_WcHbkH2.input2015-04-17 18:35 417 Raw input data for analysis
[ ]jp_WcHbkH2.jalview2015-04-17 20:41 9.1KJalview annotation file for alignment
[ ]jp_WcHbkH2.jnet2015-04-17 20:41 15KJnet secondary structure output
[TXT]jp_WcHbkH2.profile2015-04-17 20:37 65KPSIBLAST profile from alignment
[ ]jp_WcHbkH2.pssm2015-04-17 20:41 88KPSIBLAST PSSM for Jnet
[TXT]jp_WcHbkH2.results.html2016-02-15 12:18 171KJPred results page
[TXT]jp_WcHbkH2.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_WcHbkH2.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_WcHbkH2.seq2015-04-17 18:35 428 Sequence data file
[TXT]jp_WcHbkH2.simple.html2015-04-17 20:41 2.5KBrief HTML: sequence and prediction only
[TXT]jp_WcHbkH2.svg.html2015-04-17 20:42 163KJalview SVG summary of results
[ ]jp_WcHbkH2.tar.gz2015-04-17 20:42 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.