JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wb9a1.name2015-04-17 18:00 0 Job name flag file
[ ]jp_JjH9OeN.align2015-04-17 19:43 246KPSIBLAST alignment in FASTA format
[TXT]jp_JjH9OeN.als2015-04-17 19:43 3.8KAlscript command file for PS/PDF output
[ ]jp_JjH9OeN.blast.gz2015-04-17 19:40 12MCompressed PSIBLAST output file
[TXT]jp_JjH9OeN.coils.csv2015-04-17 19:43 1.8KCOILS output in CSV format
[ ]jp_JjH9OeN.coilseq.lupas_142015-04-17 19:43 12KCOILS output, window length 14
[ ]jp_JjH9OeN.coilseq.lupas_212015-04-17 19:43 12KCOILS output, window length 21
[ ]jp_JjH9OeN.coilseq.lupas_282015-04-17 19:43 12KCOILS output, window length 28
[ ]jp_JjH9OeN.concise2015-04-17 19:43 490KPrediction: coiled-coil, solvent, alignment
[ ]jp_JjH9OeN.concise.blc2015-04-17 19:43 247KBLC format prediction and alignment data
[ ]jp_JjH9OeN.concise.fasta2015-04-17 19:43 249KPrediction: coiled-coil, solvent, alignment
[ ]jp_JjH9OeN.concise.pdf2015-04-17 19:43 1.8MPDF prediction and alignment data
[ ]jp_JjH9OeN.concise.ps2015-04-17 19:43 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_JjH9OeN.fasta2015-04-17 19:34 314 Input query sequence in FASTA format
[ ]jp_JjH9OeN.full_MSA.fasta2015-04-17 19:42 24MFull MSA before JPred filters in FASTA
[TXT]jp_JjH9OeN.full_MSA.fasta.noGaps.html2015-04-17 19:44 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_JjH9OeN.full_MSA.fasta.withGaps.html2015-04-17 19:44 56MFull MSA before JPred filters in FASTA
[ ]jp_JjH9OeN.hmm2015-04-17 19:43 56KHHMer2 profile of the alignment
[TXT]jp_JjH9OeN.html2015-04-17 19:43 428KHTML prediction and alignment data
[ ]jp_JjH9OeN.input2015-04-17 18:00 304 Raw input data for analysis
[ ]jp_JjH9OeN.jalview2015-04-17 19:43 6.9KJalview annotation file for alignment
[ ]jp_JjH9OeN.jnet2015-04-17 19:43 11KJnet secondary structure output
[TXT]jp_JjH9OeN.profile2015-04-17 19:38 47KPSIBLAST profile from alignment
[ ]jp_JjH9OeN.pssm2015-04-17 19:43 64KPSIBLAST PSSM for Jnet
[TXT]jp_JjH9OeN.results.html2016-02-15 12:19 127KJPred results page
[TXT]jp_JjH9OeN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JjH9OeN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JjH9OeN.seq2015-04-17 18:00 314 Sequence data file
[TXT]jp_JjH9OeN.simple.html2015-04-17 19:43 1.9KBrief HTML: sequence and prediction only
[TXT]jp_JjH9OeN.svg.html2015-04-17 19:44 119KJalview SVG summary of results
[ ]jp_JjH9OeN.tar.gz2015-04-17 19:44 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.